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  5. Solyc09g014935.1.1

Solyc09g014935.1.1


Description : Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana (sp|q94hw2|polr1_arath : 167.0)


Gene families : OG0000375 (Archaeplastida) Phylogenetic Tree(s): OG0000375_tree ,
OG_05_0000187 (LandPlants) Phylogenetic Tree(s): OG_05_0000187_tree ,
OG_06_0000080 (SeedPlants) Phylogenetic Tree(s): OG_06_0000080_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc09g014935.1.1
Cluster HCCA: Cluster_82

Target Alias Description ECC score Gene Family Method Actions
Solyc00g500336.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.03 Archaeplastida
Solyc02g062565.1.1 No alias No annotation 0.05 Archaeplastida
Solyc06g005525.1.1 No alias no hits & (original description: none) 0.07 Archaeplastida
Solyc06g009975.1.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc06g060627.1.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc09g011695.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.06 Archaeplastida
Solyc09g018237.1.1 No alias no hits & (original description: none) 0.07 Archaeplastida
Solyc09g031513.1.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc09g065525.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.04 Archaeplastida
Solyc10g044988.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.04 Archaeplastida
Solyc12g019235.1.1 No alias No annotation 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0006020 inositol metabolic process IEP Neighborhood
BP GO:0006066 alcohol metabolic process IEP Neighborhood
BP GO:0016052 carbohydrate catabolic process IEP Neighborhood
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
BP GO:0019310 inositol catabolic process IEP Neighborhood
BP GO:0019751 polyol metabolic process IEP Neighborhood
BP GO:0044275 cellular carbohydrate catabolic process IEP Neighborhood
BP GO:0044282 small molecule catabolic process IEP Neighborhood
BP GO:0046164 alcohol catabolic process IEP Neighborhood
BP GO:0046174 polyol catabolic process IEP Neighborhood
MF GO:0050113 inositol oxygenase activity IEP Neighborhood
BP GO:1901615 organic hydroxy compound metabolic process IEP Neighborhood
BP GO:1901616 organic hydroxy compound catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR013103 RVT_2 3 73
No external refs found!