Solyc09g025240.3.1

Description : TOM endomembrane trafficking associated protein

Gene families : OG0000369 (Archaeplastida) Phylogenetic Tree(s): OG0000369_tree ,
OG_05_0015364 (LandPlants) Phylogenetic Tree(s): OG_05_0015364_tree ,
OG_06_0015065 (SeedPlants) Phylogenetic Tree(s): OG_06_0015065_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc09g025240.3.1
Cluster	HCCA: Cluster_146

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00031p00234160	evm_27.TU.AmTr_v1...	Vesicle trafficking.endomembrane trafficking.protein...	0.05	Archaeplastida
AMTR_s00130p00102230	evm_27.TU.AmTr_v1...	Vesicle trafficking.endomembrane trafficking.protein...	0.03	Archaeplastida
GSVIVT01030233001	No alias	Vesicle trafficking.endomembrane trafficking.protein...	0.03	Archaeplastida
LOC_Os05g39760.1	No alias	TOM endomembrane trafficking associated protein	0.03	Archaeplastida
LOC_Os10g42724.1	No alias	TOM endomembrane trafficking associated protein	0.05	Archaeplastida
MA_12709g0010	No alias	TOM endomembrane trafficking associated protein	0.03	Archaeplastida
Pp3c20_7060V3.1	No alias	ENTH/VHS/GAT family protein	0.05	Archaeplastida
Smo176673	No alias	Vesicle trafficking.endomembrane trafficking.protein...	0.03	Archaeplastida
Zm00001e011075_P001	No alias	TOM endomembrane trafficking associated protein	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	IEA	Interproscan
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0015031	protein transport	None	Extended
BP	GO:0015833	peptide transport	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0042886	amide transport	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	Neighborhood
MF	GO:0005488	binding	IEP	Neighborhood
MF	GO:0005515	protein binding	IEP	Neighborhood
MF	GO:0005524	ATP binding	IEP	Neighborhood
BP	GO:0006357	regulation of transcription by RNA polymerase II	IEP	Neighborhood
BP	GO:0006606	protein import into nucleus	IEP	Neighborhood
BP	GO:0006897	endocytosis	IEP	Neighborhood
BP	GO:0006913	nucleocytoplasmic transport	IEP	Neighborhood
MF	GO:0008144	drug binding	IEP	Neighborhood
BP	GO:0009966	regulation of signal transduction	IEP	Neighborhood
BP	GO:0010646	regulation of cell communication	IEP	Neighborhood
CC	GO:0016592	mediator complex	IEP	Neighborhood
BP	GO:0017038	protein import	IEP	Neighborhood
MF	GO:0017076	purine nucleotide binding	IEP	Neighborhood
BP	GO:0023051	regulation of signaling	IEP	Neighborhood
MF	GO:0030554	adenyl nucleotide binding	IEP	Neighborhood
MF	GO:0031625	ubiquitin protein ligase binding	IEP	Neighborhood
MF	GO:0032553	ribonucleotide binding	IEP	Neighborhood
MF	GO:0032555	purine ribonucleotide binding	IEP	Neighborhood
MF	GO:0032559	adenyl ribonucleotide binding	IEP	Neighborhood
BP	GO:0033365	protein localization to organelle	IEP	Neighborhood
BP	GO:0034504	protein localization to nucleus	IEP	Neighborhood
BP	GO:0034613	cellular protein localization	IEP	Neighborhood
MF	GO:0035091	phosphatidylinositol binding	IEP	Neighborhood
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	Neighborhood
MF	GO:0036094	small molecule binding	IEP	Neighborhood
BP	GO:0040008	regulation of growth	IEP	Neighborhood
MF	GO:0043168	anion binding	IEP	Neighborhood
MF	GO:0044389	ubiquitin-like protein ligase binding	IEP	Neighborhood
BP	GO:0045927	positive regulation of growth	IEP	Neighborhood
BP	GO:0048518	positive regulation of biological process	IEP	Neighborhood
BP	GO:0048583	regulation of response to stimulus	IEP	Neighborhood
BP	GO:0051169	nuclear transport	IEP	Neighborhood
BP	GO:0051170	import into nucleus	IEP	Neighborhood
MF	GO:0061608	nuclear import signal receptor activity	IEP	Neighborhood
BP	GO:0070727	cellular macromolecule localization	IEP	Neighborhood
BP	GO:0072594	establishment of protein localization to organelle	IEP	Neighborhood
MF	GO:0097367	carbohydrate derivative binding	IEP	Neighborhood
BP	GO:0098657	import into cell	IEP	Neighborhood
MF	GO:0140104	molecular carrier activity	IEP	Neighborhood
MF	GO:0140142	nucleocytoplasmic carrier activity	IEP	Neighborhood
MF	GO:1901265	nucleoside phosphate binding	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR004152	GAT_dom	221	294
IPR002014	VHS_dom	43	168

External Links

No external refs found!

Solyc09g025240.3.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation