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  5. Solyc09g059157.1.1

Solyc09g059157.1.1


Description : No annotation


Gene families : OG0000100 (Archaeplastida) Phylogenetic Tree(s): OG0000100_tree ,
OG_05_0000036 (LandPlants) Phylogenetic Tree(s): OG_05_0000036_tree ,
OG_06_0000011 (SeedPlants) Phylogenetic Tree(s): OG_06_0000011_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc09g059157.1.1
Cluster HCCA: Cluster_188

Target Alias Description ECC score Gene Family Method Actions
Solyc01g150117.1.1 No alias Uncharacterized mitochondrial protein AtMg00810... 0.06 Archaeplastida
Solyc02g005608.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.09 Archaeplastida
Solyc04g050955.1.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Solyc07g015905.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.09 Archaeplastida
Solyc07g017605.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.05 Archaeplastida
Solyc09g059105.1.1 No alias No annotation 0.06 Archaeplastida
Solyc10g017725.1.1 No alias no hits & (original description: none) 0.06 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP Neighborhood
MF GO:0004519 endonuclease activity IEP Neighborhood
MF GO:0004521 endoribonuclease activity IEP Neighborhood
MF GO:0004525 ribonuclease III activity IEP Neighborhood
MF GO:0004540 ribonuclease activity IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Neighborhood
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Neighborhood
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Neighborhood
MF GO:0140098 catalytic activity, acting on RNA IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!