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  5. AMTR_s00029p00242610

AMTR_s00029p00242610 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00029.422

Description : Pollen-specific leucine-rich repeat extensin-like protein 1 OS=Arabidopsis thaliana


Gene families : OG0000279 (Archaeplastida) Phylogenetic Tree(s): OG0000279_tree ,
OG_05_0000206 (LandPlants) Phylogenetic Tree(s): OG_05_0000206_tree ,
OG_06_0000158 (SeedPlants) Phylogenetic Tree(s): OG_06_0000158_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00029p00242610
Cluster HCCA: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
AT1G49490 No alias Leucine-rich repeat (LRR) family protein 0.06 Archaeplastida
AT1G49750 No alias Leucine-rich repeat (LRR) family protein 0.03 Archaeplastida
AT2G15880 No alias Leucine-rich repeat (LRR) family protein 0.04 Archaeplastida
AT3G19020 No alias Leucine-rich repeat (LRR) family protein 0.04 Archaeplastida
AT4G13340 No alias Leucine-rich repeat (LRR) family protein 0.03 Archaeplastida
AT4G29240 No alias Leucine-rich repeat (LRR) family protein 0.03 Archaeplastida
AT4G33970 No alias Leucine-rich repeat (LRR) family protein 0.04 Archaeplastida
GSVIVT01031843001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.04 Archaeplastida
Gb_26318 No alias LRR-domain extensin 0.04 Archaeplastida
LOC_Os01g25460.1 No alias LRR-domain extensin 0.02 Archaeplastida
MA_10426391g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_3066179g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Mp8g04500.1 No alias Leucine-rich repeat extensin-like protein 1... 0.03 Archaeplastida
Pp3c12_22970V3.1 No alias Leucine-rich repeat (LRR) family protein 0.03 Archaeplastida
Pp3c4_3520V3.1 No alias Leucine-rich repeat (LRR) family protein 0.02 Archaeplastida
Solyc01g108900.4.1 No alias LRR-domain extensin 0.03 Archaeplastida
Solyc12g088950.3.1 No alias Pollen-specific leucine-rich repeat extensin-like... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Neighborhood
MF GO:0004673 protein histidine kinase activity IEP Neighborhood
MF GO:0015298 solute:cation antiporter activity IEP Neighborhood
MF GO:0015299 solute:proton antiporter activity IEP Neighborhood
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!