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  5. Solyc09g065755.1.1

Solyc09g065755.1.1


Description : histone (H2A)


Gene families : OG0001575 (Archaeplastida) Phylogenetic Tree(s): OG0001575_tree ,
OG_05_0001718 (LandPlants) Phylogenetic Tree(s): OG_05_0001718_tree ,
OG_06_0001752 (SeedPlants) Phylogenetic Tree(s): OG_06_0001752_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc09g065755.1.1
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021108.27 No alias Chromatin organisation.histones.H2A-type histone 0.02 Archaeplastida
Cre13.g567700 No alias Chromatin organisation.histones.H2A-type histone 0.02 Archaeplastida
GSVIVT01003139001 No alias Chromatin organisation.histones.H2A-type histone 0.02 Archaeplastida
Pp3c12_17610V3.1 No alias histone H2A protein 9 0.03 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006334 nucleosome assembly IEP Neighborhood
MF GO:0008170 N-methyltransferase activity IEP Neighborhood
MF GO:0008276 protein methyltransferase activity IEP Neighborhood
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
MF GO:0016278 lysine N-methyltransferase activity IEP Neighborhood
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Neighborhood
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Neighborhood
BP GO:0018208 peptidyl-proline modification IEP Neighborhood
BP GO:0022607 cellular component assembly IEP Neighborhood
CC GO:0033643 host cell part IEP Neighborhood
CC GO:0033646 host intracellular part IEP Neighborhood
CC GO:0033647 host intracellular organelle IEP Neighborhood
CC GO:0033648 host intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0034622 cellular protein-containing complex assembly IEP Neighborhood
BP GO:0034728 nucleosome organization IEP Neighborhood
CC GO:0042025 host cell nucleus IEP Neighborhood
MF GO:0042054 histone methyltransferase activity IEP Neighborhood
BP GO:0043933 protein-containing complex subunit organization IEP Neighborhood
CC GO:0044217 other organism part IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
BP GO:0065003 protein-containing complex assembly IEP Neighborhood
BP GO:0065004 protein-DNA complex assembly IEP Neighborhood
BP GO:0071824 protein-DNA complex subunit organization IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 15 108
IPR032454 Histone_H2A_C 109 138
No external refs found!