1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc09g065910.3.1

Solyc09g065910.3.1


Description : component PsbW of PS-II complex


Gene families : OG0005301 (Archaeplastida) Phylogenetic Tree(s): OG0005301_tree ,
OG_05_0004077 (LandPlants) Phylogenetic Tree(s): OG_05_0004077_tree ,
OG_06_0004960 (SeedPlants) Phylogenetic Tree(s): OG_06_0004960_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc09g065910.3.1
Cluster HCCA: Cluster_169

Target Alias Description ECC score Gene Family Method Actions
AT2G30570 PSBW photosystem II reaction center W 0.04 Archaeplastida
GSVIVT01000743001 No alias Photosynthesis.photophosphorylation.photosystem II.PS-II... 0.03 Archaeplastida
Gb_40726 No alias component PsbW of PS-II complex 0.04 Archaeplastida
LOC_Os01g56680.2 No alias component PsbW of PS-II complex 0.06 Archaeplastida
LOC_Os05g43310.1 No alias component PsbW of PS-II complex 0.06 Archaeplastida
MA_10431532g0010 No alias component PsbW of PS-II complex 0.03 Archaeplastida
Mp5g14190.1 No alias component PsbW of PS-II complex 0.03 Archaeplastida
Pp3c18_6770V3.1 No alias photosystem II reaction center W 0.03 Archaeplastida
Pp3c18_6780V3.1 No alias photosystem II reaction center W 0.06 Archaeplastida
Pp3c22_16160V3.1 No alias photosystem II reaction center W 0.03 Archaeplastida
Pp3c22_16330V3.1 No alias photosystem II reaction center W 0.03 Archaeplastida
Zm00001e019660_P002 No alias component PsbW of PS-II complex 0.07 Archaeplastida
Zm00001e027386_P002 No alias component PsbW of PS-II complex 0.06 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0009507 chloroplast IEA Interproscan
CC GO:0009523 photosystem II IEA Interproscan
BP GO:0015979 photosynthesis IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004867 serine-type endopeptidase inhibitor activity IEP Neighborhood
MF GO:0005216 ion channel activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
BP GO:0006020 inositol metabolic process IEP Neighborhood
BP GO:0006066 alcohol metabolic process IEP Neighborhood
BP GO:0006790 sulfur compound metabolic process IEP Neighborhood
BP GO:0009611 response to wounding IEP Neighborhood
BP GO:0016052 carbohydrate catabolic process IEP Neighborhood
BP GO:0016226 iron-sulfur cluster assembly IEP Neighborhood
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Neighborhood
BP GO:0019310 inositol catabolic process IEP Neighborhood
BP GO:0019751 polyol metabolic process IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
MF GO:0022838 substrate-specific channel activity IEP Neighborhood
BP GO:0031163 metallo-sulfur cluster assembly IEP Neighborhood
BP GO:0044275 cellular carbohydrate catabolic process IEP Neighborhood
BP GO:0044282 small molecule catabolic process IEP Neighborhood
BP GO:0046164 alcohol catabolic process IEP Neighborhood
BP GO:0046174 polyol catabolic process IEP Neighborhood
MF GO:0050113 inositol oxygenase activity IEP Neighborhood
BP GO:1901615 organic hydroxy compound metabolic process IEP Neighborhood
BP GO:1901616 organic hydroxy compound catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR009806 PSII_PsbW_class2 1 70
No external refs found!