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Aliases : evm_27.TU.AmTr_v1.0_scaffold00029.449
Description : Pentatricopeptide repeat-containing protein At2g33680 OS=Arabidopsis thaliana
Gene families : OG0000000 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0013558 (LandPlants) Phylogenetic Tree(s): OG_05_0013558_tree ,
OG_06_0000000 (SeedPlants) Phylogenetic Tree(s): OG_06_0000000_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AMTR_s00029p00248070 | |
| Cluster | HCCA: Cluster_55 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT3G14330 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.05 | Archaeplastida | |
| Gb_06370 | No alias | Pentatricopeptide repeat-containing protein At2g27610... | 0.03 | Archaeplastida | |
| MA_10430171g0010 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.03 | Archaeplastida | |
| MA_117650g0010 | No alias | Pentatricopeptide repeat-containing protein At1g11290,... | 0.03 | Archaeplastida | |
| MA_41676g0020 | No alias | Pentatricopeptide repeat-containing protein At3g24000,... | 0.03 | Archaeplastida | |
| Smo107700 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.03 | Archaeplastida | |
| Smo72231 | No alias | Pentatricopeptide repeat-containing protein At4g20770... | 0.02 | Archaeplastida | |
| Smo76175 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.04 | Archaeplastida | |
| Solyc04g082870.1.1 | No alias | Pentatricopeptide repeat-containing protein At1g25360... | 0.03 | Archaeplastida | |
| Solyc07g042130.4.1 | No alias | no hits & (original description: none) | 0.04 | Archaeplastida | |
| Solyc12g096510.3.1 | No alias | Pentatricopeptide repeat-containing protein At5g66520... | 0.04 | Archaeplastida | |
| Solyc12g099850.1.1 | No alias | Pentatricopeptide repeat-containing protein At1g18485... | 0.02 | Archaeplastida | |
| Zm00001e019452_P001 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
| Zm00001e039305_P001 | No alias | RNA editing factor (MEF13) | 0.03 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000275 | mitochondrial proton-transporting ATP synthase complex, catalytic core F(1) | IEP | Neighborhood |
| MF | GO:0000702 | oxidized base lesion DNA N-glycosylase activity | IEP | Neighborhood |
| MF | GO:0003684 | damaged DNA binding | IEP | Neighborhood |
| MF | GO:0004175 | endopeptidase activity | IEP | Neighborhood |
| MF | GO:0004252 | serine-type endopeptidase activity | IEP | Neighborhood |
| MF | GO:0005216 | ion channel activity | IEP | Neighborhood |
| BP | GO:0006164 | purine nucleotide biosynthetic process | IEP | Neighborhood |
| BP | GO:0006200 | obsolete ATP catabolic process | IEP | Neighborhood |
| BP | GO:0006284 | base-excision repair | IEP | Neighborhood |
| BP | GO:0006289 | nucleotide-excision repair | IEP | Neighborhood |
| BP | GO:0006508 | proteolysis | IEP | Neighborhood |
| BP | GO:0006754 | ATP biosynthetic process | IEP | Neighborhood |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | Neighborhood |
| MF | GO:0008233 | peptidase activity | IEP | Neighborhood |
| MF | GO:0008236 | serine-type peptidase activity | IEP | Neighborhood |
| MF | GO:0008534 | oxidized purine nucleobase lesion DNA N-glycosylase activity | IEP | Neighborhood |
| BP | GO:0009123 | nucleoside monophosphate metabolic process | IEP | Neighborhood |
| BP | GO:0009124 | nucleoside monophosphate biosynthetic process | IEP | Neighborhood |
| BP | GO:0009126 | purine nucleoside monophosphate metabolic process | IEP | Neighborhood |
| BP | GO:0009127 | purine nucleoside monophosphate biosynthetic process | IEP | Neighborhood |
| BP | GO:0009141 | nucleoside triphosphate metabolic process | IEP | Neighborhood |
| BP | GO:0009142 | nucleoside triphosphate biosynthetic process | IEP | Neighborhood |
| BP | GO:0009144 | purine nucleoside triphosphate metabolic process | IEP | Neighborhood |
| BP | GO:0009145 | purine nucleoside triphosphate biosynthetic process | IEP | Neighborhood |
| BP | GO:0009152 | purine ribonucleotide biosynthetic process | IEP | Neighborhood |
| BP | GO:0009156 | ribonucleoside monophosphate biosynthetic process | IEP | Neighborhood |
| BP | GO:0009161 | ribonucleoside monophosphate metabolic process | IEP | Neighborhood |
| BP | GO:0009167 | purine ribonucleoside monophosphate metabolic process | IEP | Neighborhood |
| BP | GO:0009168 | purine ribonucleoside monophosphate biosynthetic process | IEP | Neighborhood |
| BP | GO:0009199 | ribonucleoside triphosphate metabolic process | IEP | Neighborhood |
| BP | GO:0009201 | ribonucleoside triphosphate biosynthetic process | IEP | Neighborhood |
| BP | GO:0009205 | purine ribonucleoside triphosphate metabolic process | IEP | Neighborhood |
| BP | GO:0009206 | purine ribonucleoside triphosphate biosynthetic process | IEP | Neighborhood |
| BP | GO:0009260 | ribonucleotide biosynthetic process | IEP | Neighborhood |
| MF | GO:0015267 | channel activity | IEP | Neighborhood |
| MF | GO:0016787 | hydrolase activity | IEP | Neighborhood |
| MF | GO:0016799 | hydrolase activity, hydrolyzing N-glycosyl compounds | IEP | Neighborhood |
| MF | GO:0017171 | serine hydrolase activity | IEP | Neighborhood |
| MF | GO:0019104 | DNA N-glycosylase activity | IEP | Neighborhood |
| MF | GO:0022803 | passive transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0022838 | substrate-specific channel activity | IEP | Neighborhood |
| CC | GO:0033178 | proton-transporting two-sector ATPase complex, catalytic domain | IEP | Neighborhood |
| CC | GO:0044429 | mitochondrial part | IEP | Neighborhood |
| CC | GO:0044455 | mitochondrial membrane part | IEP | Neighborhood |
| CC | GO:0045261 | proton-transporting ATP synthase complex, catalytic core F(1) | IEP | Neighborhood |
| BP | GO:0046034 | ATP metabolic process | IEP | Neighborhood |
| BP | GO:0046390 | ribose phosphate biosynthetic process | IEP | Neighborhood |
| BP | GO:0055085 | transmembrane transport | IEP | Neighborhood |
| MF | GO:0070011 | peptidase activity, acting on L-amino acid peptides | IEP | Neighborhood |
| BP | GO:0072522 | purine-containing compound biosynthetic process | IEP | Neighborhood |
| CC | GO:0098798 | mitochondrial protein complex | IEP | Neighborhood |
| CC | GO:0098800 | inner mitochondrial membrane protein complex | IEP | Neighborhood |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | Neighborhood |
| No external refs found! |