1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc09g074760.1.1

Solyc09g074760.1.1


Description : component NF-YB of NF-Y transcription factor complex


Gene families : OG0000142 (Archaeplastida) Phylogenetic Tree(s): OG0000142_tree ,
OG_05_0000244 (LandPlants) Phylogenetic Tree(s): OG_05_0000244_tree ,
OG_06_0000165 (SeedPlants) Phylogenetic Tree(s): OG_06_0000165_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc09g074760.1.1
Cluster HCCA: Cluster_59

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00057p00202310 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.NF-Y... 0.06 Archaeplastida
AT2G47810 NF-YB5 nuclear factor Y, subunit B5 0.03 Archaeplastida
GSVIVT01002895001 No alias RNA biosynthesis.transcriptional activation.NF-Y... 0.03 Archaeplastida
GSVIVT01010264001 No alias RNA biosynthesis.transcriptional activation.NF-Y... 0.04 Archaeplastida
GSVIVT01010959001 No alias RNA biosynthesis.transcriptional activation.NF-Y... 0.02 Archaeplastida
GSVIVT01014689001 No alias RNA biosynthesis.transcriptional activation.NF-Y... 0.04 Archaeplastida
GSVIVT01022214001 No alias RNA biosynthesis.transcriptional activation.NF-Y... 0.03 Archaeplastida
LOC_Os01g70880.1 No alias component NF-YB of NF-Y transcription factor complex 0.04 Archaeplastida
LOC_Os07g41580.1 No alias component NF-YB of NF-Y transcription factor complex 0.03 Archaeplastida
MA_172383g0010 No alias No annotation 0.02 Archaeplastida
MA_922668g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc01g067130.4.1 No alias component NF-YB of NF-Y transcription factor complex 0.05 Archaeplastida
Solyc01g099320.4.1 No alias component NF-YB of NF-Y transcription factor complex 0.04 Archaeplastida
Zm00001e010728_P001 No alias component NF-YB of NF-Y transcription factor complex 0.05 Archaeplastida
Zm00001e015700_P001 No alias component NF-YB of NF-Y transcription factor complex 0.05 Archaeplastida
Zm00001e021676_P001 No alias component NF-YB of NF-Y transcription factor complex 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
MF GO:0005384 manganese ion transmembrane transporter activity IEP Neighborhood
BP GO:0006418 tRNA aminoacylation for protein translation IEP Neighborhood
BP GO:0006873 cellular ion homeostasis IEP Neighborhood
BP GO:0006875 cellular metal ion homeostasis IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Neighborhood
BP GO:0019725 cellular homeostasis IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
BP GO:0030003 cellular cation homeostasis IEP Neighborhood
BP GO:0030026 cellular manganese ion homeostasis IEP Neighborhood
BP GO:0042592 homeostatic process IEP Neighborhood
BP GO:0043038 amino acid activation IEP Neighborhood
BP GO:0043039 tRNA aminoacylation IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Neighborhood
BP GO:0046916 cellular transition metal ion homeostasis IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0048878 chemical homeostasis IEP Neighborhood
BP GO:0050801 ion homeostasis IEP Neighborhood
BP GO:0055065 metal ion homeostasis IEP Neighborhood
BP GO:0055071 manganese ion homeostasis IEP Neighborhood
BP GO:0055076 transition metal ion homeostasis IEP Neighborhood
BP GO:0055080 cation homeostasis IEP Neighborhood
BP GO:0055082 cellular chemical homeostasis IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0098771 inorganic ion homeostasis IEP Neighborhood
InterPro domains Description Start Stop
IPR003958 CBFA_NFYB_domain 25 89
No external refs found!