- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : TSPO autophagosome autophagic adapter protein
Gene families : OG0003242 (Archaeplastida) Phylogenetic Tree(s): OG0003242_tree ,
OG_05_0004213 (LandPlants) Phylogenetic Tree(s): OG_05_0004213_tree ,
OG_06_0009852 (SeedPlants) Phylogenetic Tree(s): OG_06_0009852_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Solyc09g074910.1.1 | |
| Cluster | HCCA: Cluster_63 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT2G47770 | ATTSPO, TSPO | TSPO(outer membrane tryptophan-rich sensory protein)-related | 0.03 | Archaeplastida | |
| LOC_Os05g05930.1 | No alias | TSPO autophagosome autophagic adapter protein | 0.08 | Archaeplastida | |
| Mp3g12180.1 | No alias | TSPO autophagosome autophagic adapter protein | 0.04 | Archaeplastida | |
| Pp3c10_6760V3.1 | No alias | TSPO(outer membrane tryptophan-rich sensory protein)-related | 0.05 | Archaeplastida | |
| Smo88870 | No alias | Vesicle trafficking.autophagosome formation.cargo... | 0.03 | Archaeplastida | |
| Zm00001e027500_P001 | No alias | TSPO autophagosome autophagic adapter protein | 0.05 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0016021 | integral component of membrane | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0003006 | developmental process involved in reproduction | IEP | Neighborhood |
| MF | GO:0004476 | mannose-6-phosphate isomerase activity | IEP | Neighborhood |
| CC | GO:0005576 | extracellular region | IEP | Neighborhood |
| CC | GO:0005618 | cell wall | IEP | Neighborhood |
| BP | GO:0007275 | multicellular organism development | IEP | Neighborhood |
| BP | GO:0009790 | embryo development | IEP | Neighborhood |
| BP | GO:0009793 | embryo development ending in seed dormancy | IEP | Neighborhood |
| MF | GO:0016762 | xyloglucan:xyloglucosyl transferase activity | IEP | Neighborhood |
| MF | GO:0016860 | intramolecular oxidoreductase activity | IEP | Neighborhood |
| MF | GO:0016861 | intramolecular oxidoreductase activity, interconverting aldoses and ketoses | IEP | Neighborhood |
| CC | GO:0030312 | external encapsulating structure | IEP | Neighborhood |
| BP | GO:0032501 | multicellular organismal process | IEP | Neighborhood |
| BP | GO:0032502 | developmental process | IEP | Neighborhood |
| MF | GO:0046914 | transition metal ion binding | IEP | Neighborhood |
| CC | GO:0048046 | apoplast | IEP | Neighborhood |
| BP | GO:0048856 | anatomical structure development | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR004307 | TspO_MBR | 56 | 196 |
| No external refs found! |