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  5. Solyc09g083310.3.1

Solyc09g083310.3.1


Description : E3 ubiquitin protein ligase DRIP2 OS=Arabidopsis thaliana (sp|q94ay3|drip2_arath : 97.8)


Gene families : OG0000710 (Archaeplastida) Phylogenetic Tree(s): OG0000710_tree ,
OG_05_0019464 (LandPlants) Phylogenetic Tree(s): OG_05_0019464_tree ,
OG_06_0018806 (SeedPlants) Phylogenetic Tree(s): OG_06_0018806_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc09g083310.3.1
Cluster HCCA: Cluster_192

Target Alias Description ECC score Gene Family Method Actions
AT1G35183 No alias unknown protein; Has 5 Blast hits to 5 proteins in 2... 0.02 Archaeplastida
AT5G13250 No alias RING finger protein 0.02 Archaeplastida
GSVIVT01000970001 No alias Protein LAX PANICLE 2 OS=Oryza sativa subsp. japonica 0.03 Archaeplastida
LOC_Os12g29500.1 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_5126g0010 No alias Protein LAX PANICLE 2 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
Mp6g09730.1 No alias Protein LAX PANICLE 2 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
Pp3c5_26550V3.1 No alias RING finger protein 0.02 Archaeplastida
Solyc01g020113.1.1 No alias no hits & (original description: none) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004252 serine-type endopeptidase activity IEP Neighborhood
CC GO:0005811 lipid droplet IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
CC GO:0012511 monolayer-surrounded lipid storage body IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood
CC GO:0031011 Ino80 complex IEP Neighborhood
CC GO:0033202 DNA helicase complex IEP Neighborhood
CC GO:0044454 nuclear chromosome part IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
CC GO:0070603 SWI/SNF superfamily-type complex IEP Neighborhood
CC GO:0097346 INO80-type complex IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
CC GO:1904949 ATPase complex IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!