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  5. Solyc09g083400.3.1

Solyc09g083400.3.1


Description : microtubule-stabilizing factor (WDL)


Gene families : OG0000788 (Archaeplastida) Phylogenetic Tree(s): OG0000788_tree ,
OG_05_0000450 (LandPlants) Phylogenetic Tree(s): OG_05_0000450_tree ,
OG_06_0003602 (SeedPlants) Phylogenetic Tree(s): OG_06_0003602_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc09g083400.3.1
Cluster HCCA: Cluster_54

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01018122001 No alias Cytoskeleton.microtubular network.microtubule... 0.02 Archaeplastida
Gb_10134 No alias microtubule-stabilizing factor (WDL) 0.02 Archaeplastida
Gb_12105 No alias microtubule-stabilizing factor (WDL) 0.07 Archaeplastida
MA_951073g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e006019_P002 No alias microtubule-stabilizing factor (WDL) 0.02 Archaeplastida
Zm00001e021245_P001 No alias microtubule-stabilizing factor (WDL) 0.04 Archaeplastida
Zm00001e024416_P002 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Neighborhood
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005088 Ras guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005381 iron ion transmembrane transporter activity IEP Neighborhood
BP GO:0006826 iron ion transport IEP Neighborhood
BP GO:0006996 organelle organization IEP Neighborhood
BP GO:0007010 cytoskeleton organization IEP Neighborhood
MF GO:0008171 O-methyltransferase activity IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
MF GO:0017048 Rho GTPase binding IEP Neighborhood
MF GO:0019899 enzyme binding IEP Neighborhood
MF GO:0030976 thiamine pyrophosphate binding IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
BP GO:0034755 iron ion transmembrane transport IEP Neighborhood
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
MF GO:1901681 sulfur compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR027329 TPX2_C 231 287
No external refs found!