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  5. Solyc09g090900.4.1

Solyc09g090900.4.1


Description : large subunit of isopropylmalate isomerase heterodimer. large subunit of methylthioalkylmalate isomerase


Gene families : OG0003192 (Archaeplastida) Phylogenetic Tree(s): OG0003192_tree ,
OG_05_0005018 (LandPlants) Phylogenetic Tree(s): OG_05_0005018_tree ,
OG_06_0005508 (SeedPlants) Phylogenetic Tree(s): OG_06_0005508_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc09g090900.4.1
Cluster HCCA: Cluster_171

Target Alias Description ECC score Gene Family Method Actions
AT4G13430 ATLEUC1, IIL1 isopropyl malate isomerase large subunit 1 0.02 Archaeplastida
Cpa|evm.model.tig00021098.7 No alias Secondary metabolism.nitrogen-containing secondary... 0.02 Archaeplastida
Cpa|evm.model.tig00021098.8 No alias 3-isopropylmalate dehydratase large subunit,... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004674 protein serine/threonine kinase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
MF GO:0008061 chitin binding IEP Neighborhood
MF GO:0010333 terpene synthase activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Neighborhood
MF GO:0016829 lyase activity IEP Neighborhood
MF GO:0016835 carbon-oxygen lyase activity IEP Neighborhood
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
InterPro domains Description Start Stop
IPR001030 Acoase/IPM_deHydtase_lsu_aba 87 354
IPR001030 Acoase/IPM_deHydtase_lsu_aba 358 495
No external refs found!