1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc09g091920.3.1

Solyc09g091920.3.1


Description : PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis thaliana (sp|q9fz86|pdcb3_arath : 102.0)


Gene families : OG0000145 (Archaeplastida) Phylogenetic Tree(s): OG0000145_tree ,
OG_05_0000072 (LandPlants) Phylogenetic Tree(s): OG_05_0000072_tree ,
OG_06_0000086 (SeedPlants) Phylogenetic Tree(s): OG_06_0000086_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc09g091920.3.1
Cluster HCCA: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00163410 evm_27.TU.AmTr_v1... PLASMODESMATA CALLOSE-BINDING PROTEIN 5 OS=Arabidopsis thaliana 0.04 Archaeplastida
AMTR_s00028p00159770 evm_27.TU.AmTr_v1... Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis thaliana 0.02 Archaeplastida
AMTR_s00044p00136030 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.04 Archaeplastida
AMTR_s00045p00081920 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.04 Archaeplastida
AMTR_s00086p00121550 evm_27.TU.AmTr_v1... Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis thaliana 0.02 Archaeplastida
AMTR_s00092p00035570 evm_27.TU.AmTr_v1... Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis thaliana 0.04 Archaeplastida
AMTR_s00110p00143620 evm_27.TU.AmTr_v1... PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis thaliana 0.02 Archaeplastida
AT1G09460 No alias Carbohydrate-binding X8 domain superfamily protein 0.03 Archaeplastida
AT1G18650 PDCB3 plasmodesmata callose-binding protein 3 0.08 Archaeplastida
AT1G26450 No alias Carbohydrate-binding X8 domain superfamily protein 0.05 Archaeplastida
AT1G29380 No alias Carbohydrate-binding X8 domain superfamily protein 0.03 Archaeplastida
AT1G79480 No alias Carbohydrate-binding X8 domain superfamily protein 0.05 Archaeplastida
AT2G03505 No alias Carbohydrate-binding X8 domain superfamily protein 0.03 Archaeplastida
AT2G30933 No alias Carbohydrate-binding X8 domain superfamily protein 0.04 Archaeplastida
AT4G05430 No alias Carbohydrate-binding X8 domain superfamily protein 0.04 Archaeplastida
AT4G13600 No alias Carbohydrate-binding X8 domain superfamily protein 0.05 Archaeplastida
AT5G08000 PDCB2, E13L3 glucan endo-1,3-beta-glucosidase-like protein 3 0.08 Archaeplastida
AT5G61130 PDCB1 plasmodesmata callose-binding protein 1 0.1 Archaeplastida
AT5G63240 No alias Carbohydrate-binding X8 domain superfamily protein 0.03 Archaeplastida
GSVIVT01007873001 No alias PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis thaliana 0.06 Archaeplastida
GSVIVT01014068001 No alias Glucan endo-1,3-beta-D-glucosidase OS=Olea europaea 0.05 Archaeplastida
GSVIVT01015894001 No alias PLASMODESMATA CALLOSE-BINDING PROTEIN 2 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01021583001 No alias Pentatricopeptide repeat-containing protein At2g17525,... 0.16 Archaeplastida
GSVIVT01025431001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
GSVIVT01031317001 No alias Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis thaliana 0.04 Archaeplastida
Gb_00481 No alias Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis... 0.06 Archaeplastida
LOC_Os03g54910.1 No alias PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis... 0.03 Archaeplastida
LOC_Os03g61780.1 No alias Major pollen allergen Ole e 10 OS=Olea europaea... 0.04 Archaeplastida
LOC_Os05g43690.1 No alias PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis... 0.04 Archaeplastida
LOC_Os06g34660.1 No alias PLASMODESMATA CALLOSE-BINDING PROTEIN 5 OS=Arabidopsis... 0.02 Archaeplastida
LOC_Os10g20650.1 No alias Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis... 0.07 Archaeplastida
MA_158566g0010 No alias Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis... 0.07 Archaeplastida
MA_210389g0010 No alias PLASMODESMATA CALLOSE-BINDING PROTEIN 5 OS=Arabidopsis... 0.05 Archaeplastida
MA_5039622g0010 No alias No annotation 0.08 Archaeplastida
MA_8718849g0010 No alias Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis... 0.03 Archaeplastida
MA_939354g0010 No alias Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis... 0.05 Archaeplastida
MA_962758g0010 No alias Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis... 0.03 Archaeplastida
Pp3c21_14040V3.1 No alias O-Glycosyl hydrolases family 17 protein 0.03 Archaeplastida
Pp3c22_6790V3.1 No alias O-Glycosyl hydrolases family 17 protein 0.04 Archaeplastida
Smo29014 No alias Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis thaliana 0.04 Archaeplastida
Solyc01g005830.4.1 No alias Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis... 0.03 Archaeplastida
Solyc03g115200.3.1 No alias PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis... 0.03 Archaeplastida
Solyc05g016390.4.1 No alias Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis... 0.05 Archaeplastida
Zm00001e002008_P001 No alias Glucan endo-1,3-beta-glucosidase 3 OS=Arabidopsis... 0.02 Archaeplastida
Zm00001e005720_P001 No alias PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis... 0.08 Archaeplastida
Zm00001e009160_P001 No alias Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis... 0.06 Archaeplastida
Zm00001e020392_P001 No alias Glucan endo-1,3-beta-glucosidase 7 OS=Arabidopsis... 0.07 Archaeplastida
Zm00001e022608_P001 No alias Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis... 0.04 Archaeplastida
Zm00001e027936_P001 No alias Glucan endo-1,3-beta-glucosidase 7 OS=Arabidopsis... 0.04 Archaeplastida
Zm00001e032121_P001 No alias Glucan endo-1,3-beta-glucosidase 3 OS=Arabidopsis... 0.04 Archaeplastida
Zm00001e037118_P002 No alias PLASMODESMATA CALLOSE-BINDING PROTEIN 5 OS=Arabidopsis... 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0006298 mismatch repair IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
MF GO:0030983 mismatched DNA binding IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
CC GO:0032993 protein-DNA complex IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044427 chromosomal part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
CC GO:0044815 DNA packaging complex IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR012946 X8 25 96
No external refs found!