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  5. AMTR_s00030p00114790

AMTR_s00030p00114790 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00030.60

No description available


Gene families : OG0000870 (Archaeplastida) Phylogenetic Tree(s): OG0000870_tree ,
OG_05_0000518 (LandPlants) Phylogenetic Tree(s): OG_05_0000518_tree ,
OG_06_0000256 (SeedPlants) Phylogenetic Tree(s): OG_06_0000256_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00030p00114790
Cluster HCCA: Cluster_103

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00234620 evm_27.TU.AmTr_v1... Enzyme classification.EC_2 transferases.EC_2.7... 0.04 Archaeplastida
AMTR_s00022p00193900 evm_27.TU.AmTr_v1... Enzyme classification.EC_2 transferases.EC_2.7... 0.03 Archaeplastida
AMTR_s00022p00195970 evm_27.TU.AmTr_v1... Enzyme classification.EC_2 transferases.EC_2.7... 0.05 Archaeplastida
AMTR_s00037p00017390 evm_27.TU.AmTr_v1... G-type lectin S-receptor-like serine/threonine-protein... 0.03 Archaeplastida
AMTR_s00074p00192300 evm_27.TU.AmTr_v1... G-type lectin S-receptor-like serine/threonine-protein... 0.04 Archaeplastida
AT5G60900 RLK1 receptor-like protein kinase 1 0.03 Archaeplastida
GSVIVT01026551001 No alias G-type lectin S-receptor-like serine/threonine-protein... 0.02 Archaeplastida
Gb_05508 No alias protein kinase (SD-2) 0.02 Archaeplastida
LOC_Os03g61310.1 No alias G-type lectin S-receptor-like serine/threonine-protein... 0.02 Archaeplastida
LOC_Os04g12540.1 No alias G-type lectin S-receptor-like serine/threonine-protein... 0.03 Archaeplastida
Solyc01g006520.3.1 No alias G-type lectin S-receptor-like serine/threonine-protein... 0.03 Archaeplastida
Solyc01g006530.1.1 No alias G-type lectin S-receptor-like serine/threonine-protein... 0.02 Archaeplastida
Solyc03g078370.1.1 No alias G-type lectin S-receptor-like serine/threonine-protein... 0.03 Archaeplastida
Zm00001e002823_P001 No alias G-type lectin S-receptor-like serine/threonine-protein... 0.03 Archaeplastida
Zm00001e018545_P001 No alias G-type lectin S-receptor-like serine/threonine-protein... 0.02 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0048544 recognition of pollen IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003729 mRNA binding IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
CC GO:0005849 mRNA cleavage factor complex IEP Neighborhood
BP GO:0006378 mRNA polyadenylation IEP Neighborhood
MF GO:0008146 sulfotransferase activity IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Neighborhood
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Neighborhood
BP GO:0031123 RNA 3'-end processing IEP Neighborhood
BP GO:0031124 mRNA 3'-end processing IEP Neighborhood
BP GO:0043631 RNA polyadenylation IEP Neighborhood
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR000858 S_locus_glycoprot_dom 73 143
No external refs found!