1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc10g005000.4.1

Solyc10g005000.4.1


Description : no hits & (original description: none)


Gene families : OG0000181 (Archaeplastida) Phylogenetic Tree(s): OG0000181_tree ,
OG_05_0008052 (LandPlants) Phylogenetic Tree(s): OG_05_0008052_tree ,
OG_06_0005013 (SeedPlants) Phylogenetic Tree(s): OG_06_0005013_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc10g005000.4.1
Cluster HCCA: Cluster_197

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00018p00247260 evm_27.TU.AmTr_v1... Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00066p00152910 evm_27.TU.AmTr_v1... Cytoskeleton.cytoskeleton-plasma membrane-cell wall... 0.05 Archaeplastida
AT5G35670 iqd33 IQ-domain 33 0.03 Archaeplastida
Gb_18106 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os03g04210.1 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_9851g0010 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Mp3g23600.1 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Mp8g06010.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Pp3c14_22560V3.1 No alias IQ-domain 6 0.02 Archaeplastida
Pp3c21_11850V3.1 No alias IQ-domain 3 0.04 Archaeplastida
Smo438938 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana 0.02 Archaeplastida
Solyc02g077260.3.1 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.06 Archaeplastida
Solyc02g083285.2.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc03g032243.1.1 No alias no hits & (original description: none) 0.06 Archaeplastida
Zm00001e027583_P001 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e029506_P001 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e036466_P001 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP Neighborhood
MF GO:0005384 manganese ion transmembrane transporter activity IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
BP GO:0006873 cellular ion homeostasis IEP Neighborhood
BP GO:0006875 cellular metal ion homeostasis IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
MF GO:0008324 cation transmembrane transporter activity IEP Neighborhood
BP GO:0009605 response to external stimulus IEP Neighborhood
BP GO:0009606 tropism IEP Neighborhood
BP GO:0010274 hydrotropism IEP Neighborhood
MF GO:0015075 ion transmembrane transporter activity IEP Neighborhood
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
BP GO:0019725 cellular homeostasis IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
BP GO:0030003 cellular cation homeostasis IEP Neighborhood
BP GO:0030026 cellular manganese ion homeostasis IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
BP GO:0042592 homeostatic process IEP Neighborhood
MF GO:0043531 ADP binding IEP Neighborhood
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Neighborhood
BP GO:0046916 cellular transition metal ion homeostasis IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
BP GO:0048878 chemical homeostasis IEP Neighborhood
BP GO:0050801 ion homeostasis IEP Neighborhood
BP GO:0055065 metal ion homeostasis IEP Neighborhood
BP GO:0055071 manganese ion homeostasis IEP Neighborhood
BP GO:0055076 transition metal ion homeostasis IEP Neighborhood
BP GO:0055080 cation homeostasis IEP Neighborhood
BP GO:0055082 cellular chemical homeostasis IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0098771 inorganic ion homeostasis IEP Neighborhood
InterPro domains Description Start Stop
IPR025064 DUF4005 166 254
No external refs found!