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  5. AMTR_s00030p00138110

AMTR_s00030p00138110 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00030.87

Description : COMPASS-like H3K4 histone methylase component WDR5B OS=Arabidopsis thaliana


Gene families : OG0000619 (Archaeplastida) Phylogenetic Tree(s): OG0000619_tree ,
OG_05_0000400 (LandPlants) Phylogenetic Tree(s): OG_05_0000400_tree ,
OG_06_0000268 (SeedPlants) Phylogenetic Tree(s): OG_06_0000268_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00030p00138110
Cluster HCCA: Cluster_63

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01019618001 No alias COMPASS-like H3K4 histone methylase component WDR5A... 0.03 Archaeplastida
LOC_Os04g44700.1 No alias COMPASS-like H3K4 histone methylase component WDR5A... 0.03 Archaeplastida
Solyc10g086430.3.1 No alias COMPASS-like H3K4 histone methylase component WDR5B... 0.03 Archaeplastida
Zm00001e006528_P001 No alias COMPASS-like H3K4 histone methylase component WDR5B... 0.05 Archaeplastida
Zm00001e041942_P002 No alias COMPASS-like H3K4 histone methylase component WDR5B... 0.08 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP Neighborhood
MF GO:0000156 phosphorelay response regulator activity IEP Neighborhood
BP GO:0000160 phosphorelay signal transduction system IEP Neighborhood
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0004871 obsolete signal transducer activity IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
BP GO:0007165 signal transduction IEP Neighborhood
BP GO:0007186 G-protein coupled receptor signaling pathway IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0008535 respiratory chain complex IV assembly IEP Neighborhood
BP GO:0009056 catabolic process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
BP GO:0016998 cell wall macromolecule catabolic process IEP Neighborhood
BP GO:0017004 cytochrome complex assembly IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
MF GO:0019899 enzyme binding IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP Neighborhood
MF GO:0031625 ubiquitin protein ligase binding IEP Neighborhood
MF GO:0031683 G-protein beta/gamma-subunit complex binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
BP GO:0034622 cellular protein-containing complex assembly IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0044036 cell wall macromolecule metabolic process IEP Neighborhood
BP GO:0044248 cellular catabolic process IEP Neighborhood
MF GO:0044389 ubiquitin-like protein ligase binding IEP Neighborhood
MF GO:0044877 protein-containing complex binding IEP Neighborhood
MF GO:0052736 beta-glucanase activity IEP Neighborhood
MF GO:0052861 glucan endo-1,3-beta-glucanase activity, C-3 substituted reducing group IEP Neighborhood
MF GO:0052862 glucan endo-1,4-beta-glucanase activity, C-3 substituted reducing group IEP Neighborhood
MF GO:0060089 molecular transducer activity IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
InterPro domains Description Start Stop
IPR001680 WD40_repeat 390 425
IPR001680 WD40_repeat 431 467
IPR001680 WD40_repeat 578 602
IPR001680 WD40_repeat 291 323
No external refs found!