Solyc10g006270.4.1


Description : No annotation


Gene families : OG0000927 (Archaeplastida) Phylogenetic Tree(s): OG0000927_tree ,
OG_05_0001268 (LandPlants) Phylogenetic Tree(s): OG_05_0001268_tree ,
OG_06_0088444 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc10g006270.4.1
Cluster HCCA: Cluster_148

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00037p00146990 evm_27.TU.AmTr_v1... Vesicle trafficking.autophagosome formation.ATG8/ATG12... 0.02 Archaeplastida
AT1G62040 ATG8C Ubiquitin-like superfamily protein 0.04 Archaeplastida
Cre16.g689650 No alias Vesicle trafficking.autophagosome formation.ATG8/ATG12... 0.02 Archaeplastida
Gb_08297 No alias ATG8 autophagosome ubiquitin-fold protein 0.04 Archaeplastida
Gb_21524 No alias ATG8 autophagosome ubiquitin-fold protein 0.07 Archaeplastida
LOC_Os07g32800.2 No alias ATG8 autophagosome ubiquitin-fold protein 0.03 Archaeplastida
MA_10426292g0030 No alias ATG8 autophagosome ubiquitin-fold protein 0.03 Archaeplastida
Mp1g21590.1 No alias ATG8 autophagosome ubiquitin-fold protein 0.03 Archaeplastida
Pp3c14_15141V3.1 No alias Ubiquitin-like superfamily protein 0.03 Archaeplastida
Pp3c1_32170V3.1 No alias Ubiquitin-like superfamily protein 0.05 Archaeplastida
Pp3c1_32190V3.1 No alias Ubiquitin-like superfamily protein 0.02 Archaeplastida
Solyc01g068060.4.1 No alias ATG8 autophagosome ubiquitin-fold protein 0.03 Archaeplastida
Zm00001e039966_P001 No alias ATG8 autophagosome ubiquitin-fold protein 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004602 glutathione peroxidase activity IEP Neighborhood
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Neighborhood
MF GO:0016840 carbon-nitrogen lyase activity IEP Neighborhood
MF GO:0016843 amine-lyase activity IEP Neighborhood
MF GO:0016844 strictosidine synthase activity IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!