1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc10g006700.1.1

Solyc10g006700.1.1


Description : Calcium-binding protein KRP1 OS=Arabidopsis thaliana (sp|o81831|carp1_arath : 129.0)


Gene families : OG0000980 (Archaeplastida) Phylogenetic Tree(s): OG0000980_tree ,
OG_05_0000586 (LandPlants) Phylogenetic Tree(s): OG_05_0000586_tree ,
OG_06_0000395 (SeedPlants) Phylogenetic Tree(s): OG_06_0000395_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc10g006700.1.1
Cluster HCCA: Cluster_44

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00234p00014000 evm_27.TU.AmTr_v1... Calcium-binding protein KIC OS=Arabidopsis thaliana 0.08 Archaeplastida
AMTR_s00234p00015090 evm_27.TU.AmTr_v1... Calcium-binding protein KIC OS=Arabidopsis thaliana 0.05 Archaeplastida
AT4G27280 No alias Calcium-binding EF-hand family protein 0.15 Archaeplastida
AT5G54490 PBP1 pinoid-binding protein 1 0.11 Archaeplastida
GSVIVT01014539001 No alias Calcium-binding protein KRP1 OS=Arabidopsis thaliana 0.06 Archaeplastida
Gb_10402 No alias Calcium-binding protein KIC OS=Arabidopsis thaliana... 0.04 Archaeplastida
Gb_17267 No alias no hits & (original description: none) 0.06 Archaeplastida
Gb_30618 No alias Calcium-binding protein KIC OS=Arabidopsis thaliana... 0.05 Archaeplastida
Gb_30620 No alias Calcium-binding protein KIC OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os02g03020.1 No alias Calcium-binding protein KIC OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os06g46950.1 No alias Calcium-binding protein KIC OS=Arabidopsis thaliana... 0.14 Archaeplastida
MA_10168323g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_10168324g0010 No alias Calcium-binding protein KIC OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_119918g0010 No alias Calcium-binding protein KIC OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_2285714g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_25900g0010 No alias Calcium-binding protein KIC OS=Arabidopsis thaliana... 0.08 Archaeplastida
MA_25900g0020 No alias Calcium-binding protein KIC OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_7489059g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e013045_P001 No alias Calcium-binding protein KIC OS=Arabidopsis thaliana... 0.06 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
MF GO:0005516 calmodulin binding IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0006073 cellular glucan metabolic process IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0044042 glucan metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044262 cellular carbohydrate metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
MF GO:0046527 glucosyltransferase activity IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
MF GO:0061630 ubiquitin protein ligase activity IEP Neighborhood
MF GO:0061659 ubiquitin-like protein ligase activity IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!