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  5. Solyc10g009270.3.1

Solyc10g009270.3.1


Description : transcription factor (bHLH)


Gene families : OG0000688 (Archaeplastida) Phylogenetic Tree(s): OG0000688_tree ,
OG_05_0000488 (LandPlants) Phylogenetic Tree(s): OG_05_0000488_tree ,
OG_06_0001395 (SeedPlants) Phylogenetic Tree(s): OG_06_0001395_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc10g009270.3.1
Cluster HCCA: Cluster_42

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00225810 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.02 Archaeplastida
AMTR_s00021p00226670 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.03 Archaeplastida
AMTR_s00099p00127980 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.03 Archaeplastida
AMTR_s00121p00026620 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.04 Archaeplastida
AT1G32640 ATMYC2, MYC2,... Basic helix-loop-helix (bHLH) DNA-binding family protein 0.04 Archaeplastida
AT2G46510 AIB, ATAIB ABA-inducible BHLH-type transcription factor 0.08 Archaeplastida
Gb_36294 No alias transcription factor (bHLH) 0.03 Archaeplastida
LOC_Os01g50940.1 No alias transcription factor (bHLH) 0.04 Archaeplastida
LOC_Os10g42430.1 No alias transcription factor (bHLH) 0.06 Archaeplastida
MA_4076g0010 No alias transcription factor (bHLH) 0.02 Archaeplastida
MA_5838g0020 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e002421_P001 No alias transcription factor (bHLH) 0.04 Archaeplastida
Zm00001e020021_P001 No alias transcription factor (bHLH) 0.07 Archaeplastida
Zm00001e037785_P002 No alias transcription factor (bHLH) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004097 catechol oxidase activity IEP Neighborhood
MF GO:0004177 aminopeptidase activity IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0015035 protein disulfide oxidoreductase activity IEP Neighborhood
MF GO:0015036 disulfide oxidoreductase activity IEP Neighborhood
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Neighborhood
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Neighborhood
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR011598 bHLH_dom 215 261
IPR025610 MYC/MYB_N 15 57
IPR025610 MYC/MYB_N 61 154
No external refs found!