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  5. Solyc10g017590.3.1

Solyc10g017590.3.1


Description : Synaptotagmin-5 OS=Arabidopsis thaliana (sp|q8l706|syt5_arath : 295.0)


Gene families : OG0000244 (Archaeplastida) Phylogenetic Tree(s): OG0000244_tree ,
OG_05_0002904 (LandPlants) Phylogenetic Tree(s): OG_05_0002904_tree ,
OG_06_0004511 (SeedPlants) Phylogenetic Tree(s): OG_06_0004511_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc10g017590.3.1
Cluster HCCA: Cluster_95

Target Alias Description ECC score Gene Family Method Actions
LOC_Os02g25060.1 No alias endoplasmic reticulum-plasma membrane tethering protein... 0.03 Archaeplastida
Pp3c23_14990V3.1 No alias synaptotagmin A 0.02 Archaeplastida
Smo77428 No alias Synaptotagmin-5 OS=Arabidopsis thaliana 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006886 intracellular protein transport IEP Neighborhood
BP GO:0008104 protein localization IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
CC GO:0030117 membrane coat IEP Neighborhood
CC GO:0030118 clathrin coat IEP Neighborhood
CC GO:0030120 vesicle coat IEP Neighborhood
CC GO:0030125 clathrin vesicle coat IEP Neighborhood
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP Neighborhood
CC GO:0030132 clathrin coat of coated pit IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
BP GO:0033036 macromolecule localization IEP Neighborhood
BP GO:0034613 cellular protein localization IEP Neighborhood
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044431 Golgi apparatus part IEP Neighborhood
CC GO:0044433 cytoplasmic vesicle part IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
BP GO:0045048 protein insertion into ER membrane IEP Neighborhood
BP GO:0045184 establishment of protein localization IEP Neighborhood
MF GO:0045735 nutrient reservoir activity IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051205 protein insertion into membrane IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
MF GO:0070569 uridylyltransferase activity IEP Neighborhood
BP GO:0070727 cellular macromolecule localization IEP Neighborhood
BP GO:0072657 protein localization to membrane IEP Neighborhood
BP GO:0090150 establishment of protein localization to membrane IEP Neighborhood
CC GO:0098797 plasma membrane protein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR039010 Synaptotagmin_SMP 58 237
IPR000008 C2_dom 253 349
No external refs found!