1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00030p00216100

AMTR_s00030p00216100 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00030.162

Description : NDR1/HIN1-like protein 3 OS=Arabidopsis thaliana


Gene families : OG0000075 (Archaeplastida) Phylogenetic Tree(s): OG0000075_tree ,
OG_05_0000104 (LandPlants) Phylogenetic Tree(s): OG_05_0000104_tree ,
OG_06_0000194 (SeedPlants) Phylogenetic Tree(s): OG_06_0000194_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00030p00216100
Cluster HCCA: Cluster_241

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00185810 evm_27.TU.AmTr_v1... NDR1/HIN1-like protein 13 OS=Arabidopsis thaliana 0.03 Archaeplastida
AT1G17620 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.03 Archaeplastida
AT2G27080 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.06 Archaeplastida
AT2G27260 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.06 Archaeplastida
AT2G35970 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.03 Archaeplastida
AT2G35980 NHL10, YLS9, ATNHL10 Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.03 Archaeplastida
AT3G11660 NHL1 NDR1/HIN1-like 1 0.02 Archaeplastida
AT3G44220 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.03 Archaeplastida
AT5G06320 NHL3 NDR1/HIN1-like 3 0.07 Archaeplastida
AT5G36970 NHL25 NDR1/HIN1-like 25 0.03 Archaeplastida
GSVIVT01027444001 No alias NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01033199001 No alias NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01037448001 No alias NDR1/HIN1-like protein 13 OS=Arabidopsis thaliana 0.05 Archaeplastida
Gb_00037 No alias NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Gb_01970 No alias NDR1/HIN1-like protein 13 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Gb_04457 No alias NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Gb_26587 No alias NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Gb_26589 No alias NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Gb_26590 No alias NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Gb_27157 No alias NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana... 0.07 Archaeplastida
LOC_Os01g59680.1 No alias NDR1/HIN1-like protein 13 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os01g64470.1 No alias NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana... 0.08 Archaeplastida
LOC_Os04g58090.1 No alias NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os04g58850.1 No alias NDR1/HIN1-like protein 2 OS=Arabidopsis thaliana... 0.12 Archaeplastida
LOC_Os05g11010.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os08g23460.1 No alias NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os11g03600.1 No alias NDR1/HIN1-like protein 13 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_10432342g0010 No alias NDR1/HIN1-like protein 3 OS=Arabidopsis thaliana... 0.05 Archaeplastida
MA_10432342g0020 No alias NDR1/HIN1-like protein 3 OS=Arabidopsis thaliana... 0.04 Archaeplastida
MA_10433706g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_118976g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_34155g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_3589796g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_3652531g0010 No alias No annotation 0.02 Archaeplastida
MA_44394g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_44394g0020 No alias NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana... 0.06 Archaeplastida
MA_47856g0010 No alias NDR1/HIN1-like protein 12 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_564044g0010 No alias NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_722404g0010 No alias NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_86810g0010 No alias NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana... 0.06 Archaeplastida
MA_9985g0010 No alias NDR1/HIN1-like protein 26 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Mp3g02160.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Mp7g19340.1 No alias NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Pp3c10_5660V3.1 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.08 Archaeplastida
Pp3c12_2240V3.1 No alias NDR1/HIN1-like 3 0.03 Archaeplastida
Pp3c23_11590V3.1 No alias NDR1/HIN1-like 2 0.03 Archaeplastida
Solyc01g009160.2.1 No alias NDR1/HIN1-like protein 13 OS=Arabidopsis thaliana... 0.06 Archaeplastida
Solyc02g036480.1.1 No alias NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Solyc02g080100.1.1 No alias NDR1/HIN1-like protein 2 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Solyc03g121620.1.1 No alias NDR1/HIN1-like protein 13 OS=Arabidopsis thaliana... 0.07 Archaeplastida
Solyc10g081970.2.1 No alias NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana... 0.08 Archaeplastida
Solyc10g081980.2.1 No alias NDR1/HIN1-like protein 3 OS=Arabidopsis thaliana... 0.07 Archaeplastida
Solyc10g150145.1.1 No alias NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Solyc11g068900.1.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e004504_P001 No alias NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e006462_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e012610_P001 No alias NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana... 0.06 Archaeplastida
Zm00001e014749_P001 No alias NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e019181_P001 No alias NDR1/HIN1-like protein 3 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Zm00001e020501_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e027782_P001 No alias No annotation 0.04 Archaeplastida
Zm00001e039222_P001 No alias NDR1/HIN1-like protein 13 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e039408_P001 No alias NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e041974_P001 No alias NDR1/HIN1-like protein 2 OS=Arabidopsis thaliana... 0.06 Archaeplastida
Zm00001e041977_P001 No alias NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0006073 cellular glucan metabolic process IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0016597 amino acid binding IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
CC GO:0031012 extracellular matrix IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
MF GO:0031406 carboxylic acid binding IEP Neighborhood
MF GO:0043177 organic acid binding IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
BP GO:0044042 glucan metabolic process IEP Neighborhood
BP GO:0044262 cellular carbohydrate metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
CC GO:0044421 extracellular region part IEP Neighborhood
MF GO:0046527 glucosyltransferase activity IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR004864 LEA_2 100 199
No external refs found!