Solyc10g047480.1.1

Description : Ubiquitin carboxyl-terminal hydrolase 20 OS=Arabidopsis thaliana (sp|q9fps7|ubp20_arath : 253.0)

Gene families : OG0000242 (Archaeplastida) Phylogenetic Tree(s): OG0000242_tree ,
OG_05_0002311 (LandPlants) Phylogenetic Tree(s): OG_05_0002311_tree ,
OG_06_0001644 (SeedPlants) Phylogenetic Tree(s): OG_06_0001644_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc10g047480.1.1
Cluster	HCCA: Cluster_82

Target	Alias	Description	ECC score	Gene Family Method
Solyc02g005000.1.1	No alias	no hits & (original description: none)	0.01	Archaeplastida
Solyc02g005600.1.1	No alias	Ubiquitin carboxyl-terminal hydrolase 20 OS=Arabidopsis...	0.02	Archaeplastida
Solyc08g021830.1.1	No alias	Ubiquitin carboxyl-terminal hydrolase 20 OS=Arabidopsis...	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
BP	GO:0006464	cellular protein modification process	None	Extended
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008233	peptidase activity	None	Extended
MF	GO:0008234	cysteine-type peptidase activity	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016579	protein deubiquitination	IEA	Interproscan
MF	GO:0016787	hydrolase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019783	ubiquitin-like protein-specific protease activity	None	Extended
BP	GO:0036211	protein modification process	None	Extended
MF	GO:0036459	thiol-dependent ubiquitinyl hydrolase activity	IEA	Interproscan
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
MF	GO:0070011	peptidase activity, acting on L-amino acid peptides	None	Extended
BP	GO:0070646	protein modification by small protein removal	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0101005	ubiquitinyl hydrolase activity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001394	Peptidase_C19_UCH	127	418

External Links

No external refs found!

Solyc10g047480.1.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation