AMTR_s00030p00234860 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00030.195

Description : RNA biosynthesis.transcriptional activation.OFP transcription factor


Gene families : OG0000130 (Archaeplastida) Phylogenetic Tree(s): OG0000130_tree ,
OG_05_0000050 (LandPlants) Phylogenetic Tree(s): OG_05_0000050_tree ,
OG_06_0000120 (SeedPlants) Phylogenetic Tree(s): OG_06_0000120_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00030p00234860
Cluster HCCA: Cluster_237

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00212750 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.OFP... 0.06 Archaeplastida
AT1G06920 OFP4, ATOFP4 ovate family protein 4 0.04 Archaeplastida
AT2G30400 OFP2, ATOFP2 ovate family protein 2 0.03 Archaeplastida
AT2G36050 ATOFP15, OFP15 ovate family protein 15 0.05 Archaeplastida
AT4G04025 No alias No description available 0.04 Archaeplastida
GSVIVT01030204001 No alias RNA biosynthesis.transcriptional activation.OFP... 0.05 Archaeplastida
LOC_Os01g12690.1 No alias transcription factor (OFP) 0.02 Archaeplastida
LOC_Os01g43610.1 No alias transcription factor (OFP) 0.04 Archaeplastida
LOC_Os01g64410.1 No alias transcription factor (OFP) 0.06 Archaeplastida
LOC_Os01g64430.1 No alias transcription factor (OFP) 0.04 Archaeplastida
LOC_Os02g45620.1 No alias transcription factor (OFP) 0.05 Archaeplastida
LOC_Os03g06350.1 No alias transcription factor (OFP) 0.02 Archaeplastida
LOC_Os04g37510.1 No alias transcription factor (OFP) 0.04 Archaeplastida
LOC_Os05g25910.1 No alias transcription factor (OFP) 0.06 Archaeplastida
LOC_Os05g44090.1 No alias transcription factor (OFP) 0.02 Archaeplastida
LOC_Os10g38880.1 No alias transcription factor (OFP) 0.02 Archaeplastida
MA_134006g0010 No alias transcription factor (OFP) 0.04 Archaeplastida
MA_2468787g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_31710g0010 No alias transcription factor (OFP) 0.03 Archaeplastida
MA_61037g0010 No alias transcription factor (OFP) 0.03 Archaeplastida
MA_8266620g0010 No alias transcription factor (OFP) 0.03 Archaeplastida
Pp3c18_15340V3.1 No alias ovate family protein 4 0.02 Archaeplastida
Solyc01g007800.3.1 No alias transcription factor (OFP) 0.04 Archaeplastida
Solyc01g007810.1.1 No alias transcription factor (OFP) 0.04 Archaeplastida
Solyc06g073040.1.1 No alias transcription factor (OFP) 0.06 Archaeplastida
Solyc06g074020.2.1 No alias transcription factor (OFP) 0.02 Archaeplastida
Solyc10g076180.1.1 No alias transcription factor (OFP) 0.03 Archaeplastida
Zm00001e000448_P001 No alias transcription factor (OFP) 0.04 Archaeplastida
Zm00001e000779_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e008181_P001 No alias transcription factor (OFP) 0.03 Archaeplastida
Zm00001e009109_P001 No alias transcription factor (OFP) 0.04 Archaeplastida
Zm00001e010976_P001 No alias transcription factor (OFP) 0.04 Archaeplastida
Zm00001e019186_P001 No alias transcription factor (OFP) 0.05 Archaeplastida
Zm00001e019432_P001 No alias transcription factor (OFP) 0.03 Archaeplastida
Zm00001e019825_P001 No alias transcription factor (OFP) 0.03 Archaeplastida
Zm00001e025928_P001 No alias transcription factor (OFP) 0.04 Archaeplastida
Zm00001e031752_P001 No alias transcription factor (OFP) 0.06 Archaeplastida
Zm00001e033910_P001 No alias transcription factor (OFP) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
CC GO:0005787 signal peptidase complex IEP Neighborhood
BP GO:0006465 signal peptide processing IEP Neighborhood
BP GO:0006869 lipid transport IEP Neighborhood
MF GO:0008289 lipid binding IEP Neighborhood
BP GO:0016485 protein processing IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0017089 glycolipid transporter activity IEP Neighborhood
CC GO:0044432 endoplasmic reticulum part IEP Neighborhood
BP GO:0046836 glycolipid transport IEP Neighborhood
MF GO:0051536 iron-sulfur cluster binding IEP Neighborhood
MF GO:0051540 metal cluster binding IEP Neighborhood
BP GO:0051604 protein maturation IEP Neighborhood
MF GO:0051861 glycolipid binding IEP Neighborhood
BP GO:1901264 carbohydrate derivative transport IEP Neighborhood
CC GO:1905368 peptidase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR006458 Ovate_C 113 166
No external refs found!