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  5. AMTR_s00030p00243810

AMTR_s00030p00243810 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00030.217

Description : Secoisolariciresinol dehydrogenase (Fragment) OS=Forsythia intermedia


Gene families : OG0000154 (Archaeplastida) Phylogenetic Tree(s): OG0000154_tree ,
OG_05_0000088 (LandPlants) Phylogenetic Tree(s): OG_05_0000088_tree ,
OG_06_0000092 (SeedPlants) Phylogenetic Tree(s): OG_06_0000092_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00030p00243810
Cluster HCCA: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00030p00244570 evm_27.TU.AmTr_v1... Secoisolariciresinol dehydrogenase (Fragment)... 0.05 Archaeplastida
AT3G42960 ATA1, TA1, ASD TAPETUM 1 0.02 Archaeplastida
GSVIVT01036069001 No alias Secoisolariciresinol dehydrogenase (Fragment)... 0.02 Archaeplastida
Gb_05039 No alias Secoisolariciresinol dehydrogenase (Fragment)... 0.03 Archaeplastida
Gb_07560 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.06 Archaeplastida
Gb_16803 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.02 Archaeplastida
Gb_25236 No alias Momilactone A synthase OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
Gb_34140 No alias Momilactone A synthase OS=Oryza sativa subsp. japonica... 0.05 Archaeplastida
LOC_Os07g46830.1 No alias Secoisolariciresinol dehydrogenase (Fragment)... 0.03 Archaeplastida
MA_10436701g0010 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.03 Archaeplastida
MA_109050g0010 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.02 Archaeplastida
MA_903039g0010 No alias Short-chain dehydrogenase reductase 4 OS=Arabidopsis... 0.03 Archaeplastida
Mp5g02670.1 No alias Zerumbone synthase OS=Zingiber zerumbet... 0.03 Archaeplastida
Smo229892 No alias Momilactone A synthase OS=Oryza sativa subsp. japonica 0.03 Archaeplastida
Solyc03g113460.1.1 No alias (-)-isopiperitenol/(-)-carveol dehydrogenase,... 0.03 Archaeplastida
Solyc11g018600.1.1 No alias Short-chain dehydrogenase reductase ATA1 OS=Arabidopsis... 0.03 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0008152 metabolic process IEA Interproscan
MF GO:0016491 oxidoreductase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0042802 identical protein binding IEP Neighborhood
BP GO:0043086 negative regulation of catalytic activity IEP Neighborhood
BP GO:0044092 negative regulation of molecular function IEP Neighborhood
BP GO:0050790 regulation of catalytic activity IEP Neighborhood
BP GO:0065009 regulation of molecular function IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!