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  5. Solyc10g074400.3.1

Solyc10g074400.3.1


Description : Endochitinase OS=Solanum tuberosum (sp|p05315|chit_soltu : 208.0)


Gene families : OG0000104 (Archaeplastida) Phylogenetic Tree(s): OG0000104_tree ,
OG_05_0000335 (LandPlants) Phylogenetic Tree(s): OG_05_0000335_tree ,
OG_06_0000542 (SeedPlants) Phylogenetic Tree(s): OG_06_0000542_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc10g074400.3.1
Cluster HCCA: Cluster_114

Target Alias Description ECC score Gene Family Method Actions
LOC_Os04g09390.1 No alias Lectin OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
MA_448160g0010 No alias Chitinase 5 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
MA_853077g0010 No alias Chitinase 6 OS=Oryza sativa subsp. japonica... 0.01 Archaeplastida
Mp7g04510.1 No alias CTL cellulose microfibrils and hemicellulose interaction protein 0.02 Archaeplastida
Pp3c13_4480V3.1 No alias Chitinase family protein 0.02 Archaeplastida
Solyc00g500347.1.1 No alias Endochitinase A OS=Nicotiana tabacum... 0.01 Archaeplastida
Solyc10g055820.3.1 No alias Basic 30 kDa endochitinase OS=Solanum lycopersicum... 0.02 Archaeplastida
Solyc10g074440.2.1 No alias Endochitinase OS=Solanum tuberosum (sp|p05315|chit_soltu : 491.0) 0.03 Archaeplastida
Solyc12g098810.2.1 No alias CTL cellulose microfibrils and hemicellulose interaction protein 0.04 Archaeplastida
Zm00001e000271_P001 No alias Chitinase 11 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
Zm00001e015056_P001 No alias Chitinase 6 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004568 chitinase activity IEA Interproscan
BP GO:0006032 chitin catabolic process IEA Interproscan
MF GO:0008061 chitin binding IEA Interproscan
BP GO:0016998 cell wall macromolecule catabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR000726 Glyco_hydro_19_cat 88 163
IPR001002 Chitin-bd_1 33 71
No external refs found!