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  5. Solyc10g076330.3.1

Solyc10g076330.3.1


Description : B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 118.0)


Gene families : OG0000238 (Archaeplastida) Phylogenetic Tree(s): OG0000238_tree ,
OG_05_0000581 (LandPlants) Phylogenetic Tree(s): OG_05_0000581_tree ,
OG_06_0003246 (SeedPlants) Phylogenetic Tree(s): OG_06_0003246_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc10g076330.3.1
Cluster HCCA: Cluster_134

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00099p00128180 evm_27.TU.AmTr_v1... B2 protein OS=Daucus carota 0.04 Archaeplastida
AT3G11000 No alias DCD (Development and Cell Death) domain protein 0.05 Archaeplastida
GSVIVT01032736001 No alias B2 protein OS=Daucus carota 0.04 Archaeplastida
Gb_18799 No alias B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 270.0) 0.02 Archaeplastida
LOC_Os01g07140.1 No alias B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 121.0) 0.02 Archaeplastida
LOC_Os06g07770.1 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_26274g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e020733_P001 No alias B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 266.0) 0.02 Archaeplastida
Zm00001e020826_P001 No alias no hits & (original description: none) 0.01 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004568 chitinase activity IEP Neighborhood
BP GO:0006022 aminoglycan metabolic process IEP Neighborhood
BP GO:0006026 aminoglycan catabolic process IEP Neighborhood
BP GO:0006030 chitin metabolic process IEP Neighborhood
BP GO:0006032 chitin catabolic process IEP Neighborhood
BP GO:0006040 amino sugar metabolic process IEP Neighborhood
MF GO:0008061 chitin binding IEP Neighborhood
BP GO:0009057 macromolecule catabolic process IEP Neighborhood
BP GO:0016458 gene silencing IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
BP GO:0016998 cell wall macromolecule catabolic process IEP Neighborhood
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Neighborhood
BP GO:0031047 gene silencing by RNA IEP Neighborhood
CC GO:0033643 host cell part IEP Neighborhood
CC GO:0033646 host intracellular part IEP Neighborhood
CC GO:0033647 host intracellular organelle IEP Neighborhood
CC GO:0033648 host intracellular membrane-bounded organelle IEP Neighborhood
CC GO:0042025 host cell nucleus IEP Neighborhood
BP GO:0042254 ribosome biogenesis IEP Neighborhood
BP GO:0042737 drug catabolic process IEP Neighborhood
BP GO:0044036 cell wall macromolecule metabolic process IEP Neighborhood
BP GO:0044085 cellular component biogenesis IEP Neighborhood
CC GO:0044217 other organism part IEP Neighborhood
BP GO:0046348 amino sugar catabolic process IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
BP GO:1901071 glucosamine-containing compound metabolic process IEP Neighborhood
BP GO:1901072 glucosamine-containing compound catabolic process IEP Neighborhood
BP GO:1901135 carbohydrate derivative metabolic process IEP Neighborhood
BP GO:1901136 carbohydrate derivative catabolic process IEP Neighborhood
BP GO:1901565 organonitrogen compound catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR013989 Dev_and_cell_death_domain 17 143
IPR006652 Kelch_1 476 530
No external refs found!