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  5. Solyc10g078660.2.1

Solyc10g078660.2.1


Description : component RPL24 of LSU proteome component


Gene families : OG0004624 (Archaeplastida) Phylogenetic Tree(s): OG0004624_tree ,
OG_05_0004905 (LandPlants) Phylogenetic Tree(s): OG_05_0004905_tree ,
OG_06_0005325 (SeedPlants) Phylogenetic Tree(s): OG_06_0005325_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc10g078660.2.1
Cluster HCCA: Cluster_209

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00103p00131250 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.06 Archaeplastida
AT2G44860 No alias Ribosomal protein L24e family protein 0.04 Archaeplastida
Cpa|evm.model.tig00001093.10 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 Archaeplastida
Cre07.g325712 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 Archaeplastida
LOC_Os01g33050.2 No alias component RPL24 of LSU proteome component 0.05 Archaeplastida
LOC_Os07g19190.1 No alias component RPL24 of LSU proteome component 0.02 Archaeplastida
Mp1g25700.1 No alias component RPL24 of LSU proteome component 0.06 Archaeplastida
Pp3c1_18050V3.1 No alias Ribosomal protein L24e family protein 0.03 Archaeplastida
Pp3c2_19310V3.1 No alias Ribosomal protein L24e family protein 0.04 Archaeplastida
Zm00001e035684_P001 No alias component RPL24 of LSU proteome component 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000469 cleavage involved in rRNA processing IEP Neighborhood
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0003743 translation initiation factor activity IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006364 rRNA processing IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0016072 rRNA metabolic process IEP Neighborhood
CC GO:0030684 preribosome IEP Neighborhood
CC GO:0030688 preribosome, small subunit precursor IEP Neighborhood
CC GO:0032040 small-subunit processome IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0034470 ncRNA processing IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0034660 ncRNA metabolic process IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
BP GO:0090305 nucleic acid phosphodiester bond hydrolysis IEP Neighborhood
BP GO:0090501 RNA phosphodiester bond hydrolysis IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR000988 Ribosomal_L24e-rel 1 65
No external refs found!