1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc10g086110.1.1

Solyc10g086110.1.1


Description : no hits & (original description: none)


Gene families : OG0000280 (Archaeplastida) Phylogenetic Tree(s): OG0000280_tree ,
OG_05_0000173 (LandPlants) Phylogenetic Tree(s): OG_05_0000173_tree ,
OG_06_0000123 (SeedPlants) Phylogenetic Tree(s): OG_06_0000123_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc10g086110.1.1
Cluster HCCA: Cluster_115

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00027p00044330 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AT4G04630 No alias Protein of unknown function, DUF584 0.02 Archaeplastida
AT4G26950 No alias Protein of unknown function, DUF584 0.02 Archaeplastida
GSVIVT01037661001 No alias No description available 0.03 Archaeplastida
LOC_Os01g52730.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os01g54450.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os07g33270.1 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_10434437g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_128998g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_2588g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_5080831g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_93306g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Smo442846 No alias No description available 0.02 Archaeplastida
Solyc10g006275.1.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e027469_P001 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004252 serine-type endopeptidase activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
BP GO:0005996 monosaccharide metabolic process IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
MF GO:0008146 sulfotransferase activity IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood
BP GO:0019321 pentose metabolic process IEP Neighborhood
BP GO:0019566 arabinose metabolic process IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0046373 L-arabinose metabolic process IEP Neighborhood
MF GO:0046556 alpha-L-arabinofuranosidase activity IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
InterPro domains Description Start Stop
IPR007608 Senescence_reg_S40 40 158
No external refs found!