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  5. Solyc11g005550.2.1

Solyc11g005550.2.1


Description : COMPASS-like H3K4 histone methylase component WDR5A OS=Arabidopsis thaliana (sp|q9m2z2|wdr5a_arath : 123.0)


Gene families : OG0006318 (Archaeplastida) Phylogenetic Tree(s): OG0006318_tree ,
OG_05_0007106 (LandPlants) Phylogenetic Tree(s): OG_05_0007106_tree ,
OG_06_0007203 (SeedPlants) Phylogenetic Tree(s): OG_06_0007203_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc11g005550.2.1
Cluster HCCA: Cluster_127

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00340p00012500 evm_27.TU.AmTr_v1... COMPASS-like H3K4 histone methylase component WDR5B... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEP Neighborhood
BP GO:0006352 DNA-templated transcription, initiation IEP Neighborhood
MF GO:0008237 metallopeptidase activity IEP Neighborhood
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Neighborhood
CC GO:0030880 RNA polymerase complex IEP Neighborhood
MF GO:0035596 methylthiotransferase activity IEP Neighborhood
MF GO:0050497 transferase activity, transferring alkylthio groups IEP Neighborhood
MF GO:0051536 iron-sulfur cluster binding IEP Neighborhood
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP Neighborhood
MF GO:0051540 metal cluster binding IEP Neighborhood
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
CC GO:1990234 transferase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR001680 WD40_repeat 9 46
IPR001680 WD40_repeat 216 256
IPR001680 WD40_repeat 52 88
IPR001680 WD40_repeat 94 130
IPR001680 WD40_repeat 263 298
IPR001680 WD40_repeat 185 210
No external refs found!