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  4. Sequence
  5. Solyc11g005860.2.1

Solyc11g005860.2.1


Description : no hits & (original description: none)


Gene families : OG0001797 (Archaeplastida) Phylogenetic Tree(s): OG0001797_tree ,
OG_05_0001805 (LandPlants) Phylogenetic Tree(s): OG_05_0001805_tree ,
OG_06_0004630 (SeedPlants) Phylogenetic Tree(s): OG_06_0004630_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc11g005860.2.1
Cluster HCCA: Cluster_193

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00071p00079220 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00071p00079410 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00071p00081130 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
Gb_00368 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os01g52900.1 No alias no hits & (original description: none) 0.07 Archaeplastida
Zm00001e019911_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e021339_P001 No alias no hits & (original description: none) 0.06 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP Neighborhood
MF GO:0004674 protein serine/threonine kinase activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
BP GO:0008037 cell recognition IEP Neighborhood
MF GO:0010333 terpene synthase activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016763 transferase activity, transferring pentosyl groups IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016829 lyase activity IEP Neighborhood
MF GO:0016835 carbon-oxygen lyase activity IEP Neighborhood
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
BP GO:0022414 reproductive process IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0048544 recognition of pollen IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
InterPro domains Description Start Stop
IPR000192 Aminotrans_V_dom 112 432
No external refs found!