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  5. Solyc11g006230.3.1

Solyc11g006230.3.1


Description : cofactor component GIF of GRF-GIF transcriptional complex


Gene families : OG0001550 (Archaeplastida) Phylogenetic Tree(s): OG0001550_tree ,
OG_05_0001254 (LandPlants) Phylogenetic Tree(s): OG_05_0001254_tree ,
OG_06_0001389 (SeedPlants) Phylogenetic Tree(s): OG_06_0001389_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc11g006230.3.1

Target Alias Description ECC score Gene Family Method Actions
AT5G28640 GIF1, GIF, ATGIF1, AN3 SSXT family protein 0.02 Archaeplastida
GSVIVT01027418001 No alias RNA biosynthesis.transcriptional activation.GRF-GIF... 0.02 Archaeplastida
GSVIVT01036262001 No alias RNA biosynthesis.transcriptional activation.GRF-GIF... 0.04 Archaeplastida
MA_137340g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Pp3c13_15090V3.1 No alias GRF1-interacting factor 3 0.03 Archaeplastida
Pp3c3_21060V3.1 No alias GRF1-interacting factor 3 0.03 Archaeplastida
Smo438421 No alias RNA biosynthesis.transcriptional activation.GRF-GIF... 0.01 Archaeplastida
Zm00001e005583_P001 No alias cofactor component GIF of GRF-GIF transcriptional complex 0.01 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003713 transcription coactivator activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
InterPro domains Description Start Stop
IPR007726 SS18_fam 20 75
No external refs found!