AMTR_s00032p00016380 (evm_27.TU.AmTr_v1.0_sc...)

Aliases : evm_27.TU.AmTr_v1.0_scaffold00032.2

Description : RNA biosynthesis.transcriptional activation.WRKY transcription factor

Gene families : OG0000007 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000087 (LandPlants) Phylogenetic Tree(s): OG_05_0000087_tree ,
OG_06_0000067 (SeedPlants) Phylogenetic Tree(s): OG_06_0000067_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00032p00016380
Cluster	HCCA: Cluster_18

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00015p00228580	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.WRKY...	0.03	Archaeplastida
AMTR_s00053p00216880	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.WRKY...	0.03	Archaeplastida
AMTR_s00077p00103580	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.WRKY...	0.04	Archaeplastida
AMTR_s00078p00171140	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.WRKY...	0.06	Archaeplastida
AT1G18860	WRKY61, ATWRKY61	WRKY DNA-binding protein 61	0.03	Archaeplastida
AT1G29280	ATWRKY65, WRKY65	WRKY DNA-binding protein 65	0.03	Archaeplastida
AT1G62300	WRKY6, ATWRKY6	WRKY family transcription factor	0.02	Archaeplastida
AT1G66550	WRKY67, ATWRKY67	WRKY DNA-binding protein 67	0.03	Archaeplastida
AT1G68150	WRKY9, ATWRKY9	WRKY DNA-binding protein 9	0.03	Archaeplastida
AT1G69810	WRKY36, ATWRKY36	WRKY DNA-binding protein 36	0.05	Archaeplastida
AT1G80590	WRKY66, ATWRKY66	WRKY DNA-binding protein 66	0.02	Archaeplastida
AT1G80840	ATWRKY40, WRKY40	WRKY DNA-binding protein 40	0.02	Archaeplastida
AT2G25000	ATWRKY60, WRKY60	WRKY DNA-binding protein 60	0.03	Archaeplastida
AT2G30590	WRKY21	WRKY DNA-binding protein 21	0.04	Archaeplastida
AT2G40740	WRKY55, ATWRKY55	WRKY DNA-binding protein 55	0.03	Archaeplastida
AT2G44745	No alias	WRKY family transcription factor	0.06	Archaeplastida
AT2G46130	WRKY43, ATWRKY43	WRKY DNA-binding protein 43	0.03	Archaeplastida
AT4G01250	WRKY22, AtWRKY22	WRKY family transcription factor	0.05	Archaeplastida
AT4G04450	WRKY42, AtWRKY42	WRKY family transcription factor	0.02	Archaeplastida
AT4G18170	WRKY28, ATWRKY28	WRKY DNA-binding protein 28	0.04	Archaeplastida
AT4G26440	MSP3, ATWRKY34, WRKY34	WRKY DNA-binding protein 34	0.02	Archaeplastida
AT4G31550	ATWRKY11, WRKY11	WRKY DNA-binding protein 11	0.04	Archaeplastida
AT4G39410	ATWRKY13, WRKY13	WRKY DNA-binding protein 13	0.04	Archaeplastida
AT5G13080	WRKY75, ATWRKY75	WRKY DNA-binding protein 75	0.03	Archaeplastida
AT5G15130	WRKY72, ATWRKY72	WRKY DNA-binding protein 72	0.02	Archaeplastida
GSVIVT01019419001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.02	Archaeplastida
GSVIVT01022067001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.02	Archaeplastida
GSVIVT01026969001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.04	Archaeplastida
GSVIVT01028129001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.04	Archaeplastida
GSVIVT01028147001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.03	Archaeplastida
GSVIVT01028244001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.03	Archaeplastida
GSVIVT01034148001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.03	Archaeplastida
Gb_07810	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Gb_08731	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Gb_12539	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Gb_17074	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Gb_25547	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Gb_26894	No alias	transcription factor (WRKY)	0.05	Archaeplastida
Gb_39366	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Gb_40261	No alias	transcription factor (WRKY)	0.02	Archaeplastida
LOC_Os01g18584.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
LOC_Os01g54600.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
LOC_Os04g50920.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
MA_103616g0010	No alias	transcription factor (WRKY)	0.02	Archaeplastida
MA_10426942g0010	No alias	transcription factor (WRKY)	0.02	Archaeplastida
MA_10434450g0010	No alias	transcription factor (WRKY)	0.02	Archaeplastida
MA_11492g0010	No alias	transcription factor (WRKY)	0.03	Archaeplastida
MA_125146g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_164675g0010	No alias	transcription factor (WRKY)	0.02	Archaeplastida
MA_212937g0010	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Mp6g16800.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Mp8g10640.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Pp3c17_19970V3.1	No alias	WRKY DNA-binding protein 7	0.02	Archaeplastida
Pp3c20_12200V3.1	No alias	WRKY family transcription factor	0.02	Archaeplastida
Pp3c7_24490V3.1	No alias	WRKY DNA-binding protein 57	0.02	Archaeplastida
Pp3c8_4400V3.1	No alias	WRKY DNA-binding protein 2	0.02	Archaeplastida
Solyc01g079360.4.1	No alias	transcription factor (WRKY)	0.04	Archaeplastida
Solyc01g095100.4.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Solyc04g078550.3.1	No alias	transcription factor (WRKY)	0.04	Archaeplastida
Solyc05g055750.3.1	No alias	transcription factor (WRKY)	0.04	Archaeplastida
Solyc06g068460.3.1	No alias	transcription factor (WRKY)	0.04	Archaeplastida
Solyc08g081630.2.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Solyc10g005680.2.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Solyc12g056750.3.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Zm00001e002502_P001	No alias	transcription factor (WRKY)	0.06	Archaeplastida
Zm00001e003146_P002	No alias	transcription factor (WRKY)	0.05	Archaeplastida
Zm00001e007070_P001	No alias	transcription factor (WRKY)	0.07	Archaeplastida
Zm00001e010048_P001	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Zm00001e011098_P001	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Zm00001e013838_P001	No alias	no hits & (original description: none)	0.02	Archaeplastida
Zm00001e015531_P001	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Zm00001e015980_P001	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Zm00001e016622_P001	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Zm00001e018502_P001	No alias	transcription factor (WRKY)	0.05	Archaeplastida
Zm00001e020279_P001	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Zm00001e023305_P002	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Zm00001e024352_P003	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Zm00001e025096_P001	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Zm00001e027140_P002	No alias	transcription factor (WRKY). transcription factor (WRKY33)	0.02	Archaeplastida
Zm00001e027301_P001	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Zm00001e028011_P002	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Zm00001e029092_P002	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Zm00001e030443_P001	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Zm00001e032189_P001	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Zm00001e032453_P001	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Zm00001e037631_P001	No alias	transcription factor (WRKY)	0.04	Archaeplastida
Zm00001e041561_P001	No alias	transcription factor (WRKY)	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003755	peptidyl-prolyl cis-trans isomerase activity	IEP	Neighborhood
MF	GO:0003840	obsolete gamma-glutamyltransferase activity	IEP	Neighborhood
MF	GO:0003885	D-arabinono-1,4-lactone oxidase activity	IEP	Neighborhood
MF	GO:0004672	protein kinase activity	IEP	Neighborhood
BP	GO:0006464	cellular protein modification process	IEP	Neighborhood
BP	GO:0006468	protein phosphorylation	IEP	Neighborhood
BP	GO:0006749	glutathione metabolic process	IEP	Neighborhood
BP	GO:0006793	phosphorus metabolic process	IEP	Neighborhood
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	Neighborhood
MF	GO:0008762	UDP-N-acetylmuramate dehydrogenase activity	IEP	Neighborhood
MF	GO:0016301	kinase activity	IEP	Neighborhood
BP	GO:0016310	phosphorylation	IEP	Neighborhood
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	Neighborhood
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	Neighborhood
MF	GO:0016859	cis-trans isomerase activity	IEP	Neighborhood
MF	GO:0016899	oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor	IEP	Neighborhood
BP	GO:0036211	protein modification process	IEP	Neighborhood
BP	GO:0043412	macromolecule modification	IEP	Neighborhood
MF	GO:0140096	catalytic activity, acting on a protein	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR003657	WRKY_dom	207	265

External Links

No external refs found!

AMTR_s00032p00016380 (evm_27.TU.AmTr_v1.0_sc...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation