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  5. Solyc11g006820.2.1

Solyc11g006820.2.1


Description : component Sm-G of U1/U2/U4/U5-associated Sm accessory ribonucleoprotein complex


Gene families : OG0001659 (Archaeplastida) Phylogenetic Tree(s): OG0001659_tree ,
OG_05_0004881 (LandPlants) Phylogenetic Tree(s): OG_05_0004881_tree ,
OG_06_0006017 (SeedPlants) Phylogenetic Tree(s): OG_06_0006017_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc11g006820.2.1
Cluster HCCA: Cluster_237

Target Alias Description ECC score Gene Family Method Actions
LOC_Os03g29740.1 No alias component Sm-G of U1/U2/U4/U5-associated Sm accessory... 0.04 Archaeplastida
LOC_Os07g41790.2 No alias component Sm-G of U1/U2/U4/U5-associated Sm accessory... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004568 chitinase activity IEP Neighborhood
CC GO:0005739 mitochondrion IEP Neighborhood
BP GO:0006022 aminoglycan metabolic process IEP Neighborhood
BP GO:0006026 aminoglycan catabolic process IEP Neighborhood
BP GO:0006030 chitin metabolic process IEP Neighborhood
BP GO:0006032 chitin catabolic process IEP Neighborhood
BP GO:0006040 amino sugar metabolic process IEP Neighborhood
BP GO:0008535 respiratory chain complex IV assembly IEP Neighborhood
BP GO:0016998 cell wall macromolecule catabolic process IEP Neighborhood
BP GO:0017004 cytochrome complex assembly IEP Neighborhood
BP GO:0033108 mitochondrial respiratory chain complex assembly IEP Neighborhood
BP GO:0033617 mitochondrial respiratory chain complex IV assembly IEP Neighborhood
BP GO:0042737 drug catabolic process IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
BP GO:0044036 cell wall macromolecule metabolic process IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
BP GO:0046348 amino sugar catabolic process IEP Neighborhood
BP GO:1901071 glucosamine-containing compound metabolic process IEP Neighborhood
BP GO:1901072 glucosamine-containing compound catabolic process IEP Neighborhood
BP GO:1901136 carbohydrate derivative catabolic process IEP Neighborhood
BP GO:1901565 organonitrogen compound catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001163 LSM_dom_euk/arc 9 71
No external refs found!