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  5. Solyc11g007290.1.1

Solyc11g007290.1.1


Description : subfamily ABCG transporter


Gene families : OG0000050 (Archaeplastida) Phylogenetic Tree(s): OG0000050_tree ,
OG_05_0000049 (LandPlants) Phylogenetic Tree(s): OG_05_0000049_tree ,
OG_06_0000052 (SeedPlants) Phylogenetic Tree(s): OG_06_0000052_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc11g007290.1.1
Cluster HCCA: Cluster_49

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00056p00117010 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.02 Archaeplastida
AMTR_s00122p00120860 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.03 Archaeplastida
AT1G66950 PDR11, ATPDR11 pleiotropic drug resistance 11 0.03 Archaeplastida
AT4G15230 ATPDR2, PDR2 pleiotropic drug resistance 2 0.02 Archaeplastida
GSVIVT01031378001 No alias Solute transport.primary active transport.ABC... 0.02 Archaeplastida
Gb_28918 No alias subfamily ABCG transporter 0.03 Archaeplastida
Gb_30092 No alias subfamily ABCG transporter 0.02 Archaeplastida
Gb_30095 No alias subfamily ABCG transporter 0.02 Archaeplastida
Gb_37006 No alias subfamily ABCG transporter 0.03 Archaeplastida
MA_10429038g0010 No alias subfamily ABCG transporter 0.01 Archaeplastida
MA_17319g0020 No alias subfamily ABCG transporter 0.03 Archaeplastida
MA_630122g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Mp2g21800.1 No alias subfamily ABCG transporter 0.03 Archaeplastida
Smo133564 No alias Solute transport.primary active transport.ABC... 0.02 Archaeplastida
Smo412699 No alias Solute transport.primary active transport.ABC... 0.02 Archaeplastida
Smo417266 No alias Solute transport.primary active transport.ABC... 0.02 Archaeplastida
Solyc11g067000.3.1 No alias subfamily ABCG transporter 0.04 Archaeplastida
Zm00001e027849_P001 No alias subfamily ABCG transporter 0.01 Archaeplastida
Zm00001e033689_P001 No alias subfamily ABCG transporter 0.03 Archaeplastida
Zm00001e033690_P001 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0016887 ATPase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Neighborhood
BP GO:0042254 ribosome biogenesis IEP Neighborhood
BP GO:0044085 cellular component biogenesis IEP Neighborhood
InterPro domains Description Start Stop
IPR013525 ABC_2_trans 1191 1403
IPR013525 ABC_2_trans 528 740
IPR003439 ABC_transporter-like 192 374
IPR003439 ABC_transporter-like 894 1046
IPR029481 ABC_trans_N 116 167
IPR013581 PDR_assoc 745 811
No external refs found!