Solyc11g008560.2.1

Description : transcription factor (AP2)

Gene families : OG0000068 (Archaeplastida) Phylogenetic Tree(s): OG0000068_tree ,
OG_05_0000090 (LandPlants) Phylogenetic Tree(s): OG_05_0000090_tree ,
OG_06_0000054 (SeedPlants) Phylogenetic Tree(s): OG_06_0000054_tree

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc11g008560.2.1
Cluster	HCCA: Cluster_78

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00019p00086450	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AMTR_s00019p00225230	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	Archaeplastida
AMTR_s00066p00028460	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AMTR_s00101p00022740	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	Archaeplastida
AT1G51190	PLT2	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT1G72570	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT1G79700	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT2G28550	RAP2.7, TOE1	related to AP2.7	0.03	Archaeplastida
AT3G20840	PLT1	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT3G54320	WRI1, ATWRI1, ASML1, WRI	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT5G10510	PLT3, AIL6	AINTEGUMENTA-like 6	0.03	Archaeplastida
AT5G17430	BBM	Integrase-type DNA-binding superfamily protein	0.05	Archaeplastida
AT5G57390	AIL5, EMK, CHO1	AINTEGUMENTA-like 5	0.03	Archaeplastida
Cre08.g385350	No alias	No description available	0.02	Archaeplastida
GSVIVT01002536001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01011350001	No alias	External stimuli response.biotic...	0.03	Archaeplastida
GSVIVT01016097001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01016352001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01023697001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.05	Archaeplastida
GSVIVT01025307001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01027345001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
Gb_18139	No alias	transcription factor (AP2)	0.03	Archaeplastida
Gb_18560	No alias	transcription factor (AP2)	0.02	Archaeplastida
Gb_24420	No alias	transcription factor (AP2)	0.02	Archaeplastida
LOC_Os01g59780.1	No alias	transcription factor (AP2)	0.02	Archaeplastida
LOC_Os01g67410.1	No alias	transcription factor (AP2)	0.08	Archaeplastida
LOC_Os02g40070.1	No alias	transcription factor (AP2)	0.07	Archaeplastida
LOC_Os03g07940.1	No alias	transcription factor (AP2)	0.03	Archaeplastida
LOC_Os03g12950.1	No alias	no description available(sp\|q84z02\|crl5_orysj : 102.0)	0.03	Archaeplastida
LOC_Os03g19900.1	No alias	transcription factor (AP2)	0.03	Archaeplastida
LOC_Os04g42570.1	No alias	transcription factor (AP2)	0.12	Archaeplastida
LOC_Os06g05340.1	No alias	transcription factor (AP2). RAM1-dependent transcription...	0.02	Archaeplastida
LOC_Os06g44750.1	No alias	transcription factor (AP2)	0.05	Archaeplastida
LOC_Os07g03250.1	No alias	transcription factor (AP2)	0.03	Archaeplastida
LOC_Os08g34360.1	No alias	transcription factor (AP2)	0.03	Archaeplastida
LOC_Os11g19060.1	No alias	transcription factor (AP2)	0.04	Archaeplastida
MA_10005612g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_113625g0010	No alias	no hits & (original description: none)	0.05	Archaeplastida
MA_196219g0010	No alias	transcription factor (AP2)	0.06	Archaeplastida
MA_8090186g0010	No alias	transcription factor (AP2)	0.03	Archaeplastida
MA_86195g0010	No alias	transcription factor (AP2)	0.08	Archaeplastida
MA_95471g0010	No alias	transcription factor (AP2)	0.03	Archaeplastida
Pp3c10_24550V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
Pp3c15_4400V3.1	No alias	target of early activation tagged (EAT) 2	0.02	Archaeplastida
Pp3c23_13360V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
Pp3c9_25400V3.1	No alias	AINTEGUMENTA-like 5	0.02	Archaeplastida
Solyc03g044300.3.1	No alias	transcription factor (AP2)	0.04	Archaeplastida
Solyc05g051380.4.1	No alias	transcription factor (AP2)	0.05	Archaeplastida
Solyc12g010490.3.1	No alias	transcription factor (AP2)	0.03	Archaeplastida
Zm00001e005817_P003	No alias	transcription factor (AP2)	0.02	Archaeplastida
Zm00001e015104_P001	No alias	transcription factor (AP2)	0.13	Archaeplastida
Zm00001e018951_P001	No alias	transcription factor (AP2)	0.09	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0001871	pattern binding	IEP	Neighborhood
MF	GO:0003824	catalytic activity	IEP	Neighborhood
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	Neighborhood
MF	GO:0004650	polygalacturonase activity	IEP	Neighborhood
MF	GO:0004857	enzyme inhibitor activity	IEP	Neighborhood
MF	GO:0008146	sulfotransferase activity	IEP	Neighborhood
MF	GO:0008168	methyltransferase activity	IEP	Neighborhood
MF	GO:0015291	secondary active transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015297	antiporter activity	IEP	Neighborhood
MF	GO:0016740	transferase activity	IEP	Neighborhood
MF	GO:0016741	transferase activity, transferring one-carbon groups	IEP	Neighborhood
MF	GO:0016782	transferase activity, transferring sulfur-containing groups	IEP	Neighborhood
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	Neighborhood
MF	GO:0030246	carbohydrate binding	IEP	Neighborhood
MF	GO:0030247	polysaccharide binding	IEP	Neighborhood
MF	GO:0030599	pectinesterase activity	IEP	Neighborhood
BP	GO:0042545	cell wall modification	IEP	Neighborhood
MF	GO:0042910	xenobiotic transmembrane transporter activity	IEP	Neighborhood
BP	GO:0045229	external encapsulating structure organization	IEP	Neighborhood
MF	GO:0052689	carboxylic ester hydrolase activity	IEP	Neighborhood
BP	GO:0071554	cell wall organization or biogenesis	IEP	Neighborhood
BP	GO:0071555	cell wall organization	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	266	324
IPR001471	AP2/ERF_dom	368	418

External Links

No external refs found!

Solyc11g008560.2.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation