1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc11g009100.2.1

Solyc11g009100.2.1


Description : subfamily ABCG transporter


Gene families : OG0000249 (Archaeplastida) Phylogenetic Tree(s): OG0000249_tree ,
OG_05_0000734 (LandPlants) Phylogenetic Tree(s): OG_05_0000734_tree ,
OG_06_0000499 (SeedPlants) Phylogenetic Tree(s): OG_06_0000499_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc11g009100.2.1
Cluster HCCA: Cluster_201

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00215p00017850 evm_27.TU.AmTr_v1... ABC transporter G family member 11 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00216p00024260 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.03 Archaeplastida
AMTR_s00429p00012440 evm_27.TU.AmTr_v1... ABC transporter G family member 11 OS=Arabidopsis thaliana 0.03 Archaeplastida
AT1G17840 ATWBC11, ABCG11,... white-brown complex homolog protein 11 0.04 Archaeplastida
AT1G51460 No alias ABC-2 type transporter family protein 0.04 Archaeplastida
AT1G51500 D3, CER5,... ABC-2 type transporter family protein 0.03 Archaeplastida
AT3G21090 No alias ABC-2 type transporter family protein 0.03 Archaeplastida
Cpa|evm.model.tig00020904.29 No alias ABC transporter G family member 14 OS=Arabidopsis thaliana 0.01 Archaeplastida
GSVIVT01015767001 No alias Solute transport.primary active transport.ABC... 0.03 Archaeplastida
GSVIVT01031529001 No alias Solute transport.primary active transport.ABC... 0.04 Archaeplastida
Gb_00371 No alias subfamily ABCG transporter 0.04 Archaeplastida
Gb_08227 No alias ABC transporter G family member 11 OS=Arabidopsis... 0.03 Archaeplastida
Gb_08228 No alias ABC transporter G family member 11 OS=Arabidopsis... 0.03 Archaeplastida
Gb_18403 No alias suberin/cutin lipid exporter (DSO). wax lipid exporter... 0.06 Archaeplastida
Gb_18495 No alias ABC transporter G family member 11 OS=Arabidopsis... 0.07 Archaeplastida
Gb_21000 No alias subfamily ABCG transporter 0.05 Archaeplastida
Gb_34149 No alias suberin/cutin lipid exporter (DSO). subfamily ABCG transporter 0.04 Archaeplastida
LOC_Os04g44610.1 No alias suberin/cutin lipid exporter (DSO). subfamily ABCG transporter 0.05 Archaeplastida
LOC_Os05g13520.1 No alias wax lipid exporter (CER5). subfamily ABCG transporter 0.04 Archaeplastida
LOC_Os07g18874.1 No alias subfamily ABCG transporter 0.02 Archaeplastida
LOC_Os09g03939.1 No alias subfamily ABCG transporter 0.06 Archaeplastida
LOC_Os09g29660.1 No alias subfamily ABCG transporter 0.06 Archaeplastida
LOC_Os12g22284.1 No alias subfamily ABCG transporter 0.04 Archaeplastida
MA_10436774g0010 No alias subfamily ABCG transporter 0.03 Archaeplastida
MA_69480g0010 No alias suberin/cutin lipid exporter (DSO). wax lipid exporter... 0.04 Archaeplastida
MA_7934311g0010 No alias ABC transporter G family member 11 OS=Arabidopsis... 0.04 Archaeplastida
Mp2g16700.1 No alias suberin/cutin lipid exporter (DSO). subfamily ABCG transporter 0.04 Archaeplastida
Mp4g01480.1 No alias subfamily ABCG transporter 0.03 Archaeplastida
Mp4g11430.1 No alias subfamily ABCG transporter 0.02 Archaeplastida
Pp3c10_22200V3.1 No alias ABC-2 type transporter family protein 0.03 Archaeplastida
Pp3c3_33380V3.1 No alias white-brown complex homolog protein 11 0.02 Archaeplastida
Pp3c6_10410V3.1 No alias white-brown complex homolog protein 11 0.05 Archaeplastida
Smo111387 No alias ABC transporter G family member 15 OS=Arabidopsis thaliana 0.02 Archaeplastida
Smo127931 No alias Solute transport.primary active transport.ABC... 0.02 Archaeplastida
Smo169481 No alias Solute transport.primary active transport.ABC... 0.02 Archaeplastida
Smo171321 No alias Solute transport.primary active transport.ABC... 0.05 Archaeplastida
Smo234186 No alias Solute transport.primary active transport.ABC... 0.1 Archaeplastida
Smo419486 No alias ABC transporter G family member 11 OS=Arabidopsis thaliana 0.02 Archaeplastida
Solyc01g105450.4.1 No alias subfamily ABCG transporter 0.04 Archaeplastida
Solyc03g019760.4.1 No alias suberin/cutin lipid exporter (DSO). subfamily ABCG transporter 0.09 Archaeplastida
Solyc06g072090.3.1 No alias suberin/cutin lipid exporter (DSO). subfamily ABCG transporter 0.02 Archaeplastida
Solyc11g065350.2.1 No alias wax lipid exporter (CER5). subfamily ABCG transporter 0.04 Archaeplastida
Zm00001e012621_P002 No alias suberin/cutin lipid exporter (DSO). subfamily ABCG transporter 0.09 Archaeplastida
Zm00001e027165_P003 No alias wax lipid exporter (CER5). subfamily ABCG transporter 0.05 Archaeplastida
Zm00001e033298_P002 No alias subfamily ABCG transporter 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0016887 ATPase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004252 serine-type endopeptidase activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
MF GO:0008134 transcription factor binding IEP Neighborhood
MF GO:0008194 UDP-glycosyltransferase activity IEP Neighborhood
MF GO:0016840 carbon-nitrogen lyase activity IEP Neighborhood
MF GO:0016843 amine-lyase activity IEP Neighborhood
MF GO:0016844 strictosidine synthase activity IEP Neighborhood
MF GO:0017025 TBP-class protein binding IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like 62 212
IPR013525 ABC_2_trans 361 573
No external refs found!