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  5. Solyc11g012510.3.1

Solyc11g012510.3.1


Description : transcription factor (GRAS)


Gene families : OG0001538 (Archaeplastida) Phylogenetic Tree(s): OG0001538_tree ,
OG_05_0000997 (LandPlants) Phylogenetic Tree(s): OG_05_0000997_tree ,
OG_06_0001832 (SeedPlants) Phylogenetic Tree(s): OG_06_0001832_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc11g012510.3.1
Cluster HCCA: Cluster_240

Target Alias Description ECC score Gene Family Method Actions
AT1G50600 SCL5 scarecrow-like 5 0.03 Archaeplastida
AT4G17230 SCL13 SCARECROW-like 13 0.03 Archaeplastida
GSVIVT01010007001 No alias RNA biosynthesis.transcriptional activation.GRAS... 0.03 Archaeplastida
GSVIVT01030047001 No alias RNA biosynthesis.transcriptional activation.GRAS... 0.03 Archaeplastida
GSVIVT01037777001 No alias RNA biosynthesis.transcriptional activation.GRAS... 0.07 Archaeplastida
Gb_40278 No alias transcription factor (GRAS) 0.04 Archaeplastida
LOC_Os07g36170.2 No alias transcription factor (GRAS) 0.03 Archaeplastida
LOC_Os07g39470.1 No alias transcription factor (GRAS) 0.02 Archaeplastida
Pp3c2_30770V3.1 No alias scarecrow-like 5 0.02 Archaeplastida
Solyc05g054170.4.1 No alias transcription factor (GRAS) 0.03 Archaeplastida
Solyc07g063940.2.1 No alias transcription factor (GRAS) 0.07 Archaeplastida
Zm00001e010646_P001 No alias transcription factor (GRAS) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0004252 serine-type endopeptidase activity IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR005202 TF_GRAS 1 334
No external refs found!