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  5. Solyc11g013260.3.1

Solyc11g013260.3.1


Description : prohibitin component of FtsH3/10 matrix-AAA protease heterodimers


Gene families : OG0000812 (Archaeplastida) Phylogenetic Tree(s): OG0000812_tree ,
OG_05_0003215 (LandPlants) Phylogenetic Tree(s): OG_05_0003215_tree ,
OG_06_0003326 (SeedPlants) Phylogenetic Tree(s): OG_06_0003326_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc11g013260.3.1
Cluster HCCA: Cluster_209

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00058p00112040 evm_27.TU.AmTr_v1... Prohibitin-1, mitochondrial OS=Arabidopsis thaliana 0.03 Archaeplastida
AT3G27280 PHB4, ATPHB4 prohibitin 4 0.05 Archaeplastida
AT4G28510 PHB1, ATPHB1 prohibitin 1 0.05 Archaeplastida
Cpa|evm.model.tig00000404.42 No alias Protein degradation.peptidase families.metallopeptidase... 0.02 Archaeplastida
Cre02.g088000 No alias Prohibitin-1, mitochondrial OS=Arabidopsis thaliana 0.09 Archaeplastida
Cre12.g519350 No alias Protein degradation.peptidase families.metallopeptidase... 0.03 Archaeplastida
GSVIVT01001841001 No alias Prohibitin-3, mitochondrial OS=Arabidopsis thaliana 0.05 Archaeplastida
GSVIVT01027465001 No alias Prohibitin-1, mitochondrial OS=Arabidopsis thaliana 0.06 Archaeplastida
GSVIVT01036736001 No alias Prohibitin-1, mitochondrial OS=Arabidopsis thaliana 0.06 Archaeplastida
Gb_09762 No alias prohibitin component of FtsH3/10 matrix-AAA protease heterodimers 0.03 Archaeplastida
Gb_24064 No alias Prohibitin-1, mitochondrial OS=Arabidopsis thaliana... 0.04 Archaeplastida
Gb_25089 No alias prohibitin component of FtsH3/10 matrix-AAA protease heterodimers 0.03 Archaeplastida
LOC_Os03g62490.1 No alias Prohibitin-2, mitochondrial OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os07g15880.1 No alias Prohibitin-2, mitochondrial OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_461651g0010 No alias Prohibitin-6, mitochondrial OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_9438062g0010 No alias Prohibitin-1, mitochondrial OS=Arabidopsis thaliana... 0.04 Archaeplastida
Pp3c23_22260V3.1 No alias prohibitin 4 0.05 Archaeplastida
Pp3c25_1160V3.1 No alias prohibitin 6 0.02 Archaeplastida
Smo444067 No alias Prohibitin-2, mitochondrial OS=Arabidopsis thaliana 0.03 Archaeplastida
Zm00001e006309_P001 No alias Prohibitin-1, mitochondrial OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e009600_P001 No alias Prohibitin-2, mitochondrial OS=Arabidopsis thaliana... 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003852 2-isopropylmalate synthase activity IEP Neighborhood
MF GO:0004019 adenylosuccinate synthase activity IEP Neighborhood
MF GO:0004298 threonine-type endopeptidase activity IEP Neighborhood
MF GO:0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
CC GO:0005730 nucleolus IEP Neighborhood
CC GO:0005759 mitochondrial matrix IEP Neighborhood
CC GO:0005839 proteasome core complex IEP Neighborhood
BP GO:0006551 leucine metabolic process IEP Neighborhood
BP GO:0009081 branched-chain amino acid metabolic process IEP Neighborhood
BP GO:0009082 branched-chain amino acid biosynthetic process IEP Neighborhood
BP GO:0009098 leucine biosynthetic process IEP Neighborhood
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Neighborhood
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Neighborhood
CC GO:0031974 membrane-enclosed lumen IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0042254 ribosome biogenesis IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
CC GO:0043233 organelle lumen IEP Neighborhood
BP GO:0044085 cellular component biogenesis IEP Neighborhood
MF GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEP Neighborhood
MF GO:0070003 threonine-type peptidase activity IEP Neighborhood
CC GO:0070013 intracellular organelle lumen IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1901566 organonitrogen compound biosynthetic process IEP Neighborhood
BP GO:1901607 alpha-amino acid biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001107 Band_7 33 211
No external refs found!