1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00032p00133570

AMTR_s00032p00133570 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00032.93

Description : Protein biosynthesis.translation elongation.eEF2 mRNA-translocation factor


Gene families : OG0001511 (Archaeplastida) Phylogenetic Tree(s): OG0001511_tree ,
OG_05_0001368 (LandPlants) Phylogenetic Tree(s): OG_05_0001368_tree ,
OG_06_0001406 (SeedPlants) Phylogenetic Tree(s): OG_06_0001406_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00032p00133570
Cluster HCCA: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
AT1G56070 LOS1 Ribosomal protein S5/Elongation factor G/III/V family protein 0.05 Archaeplastida
Cpa|evm.model.tig00021464.39 No alias Protein biosynthesis.translation elongation.eEF2... 0.02 Archaeplastida
Cre12.g516200 No alias Protein biosynthesis.translation elongation.eEF2... 0.03 Archaeplastida
GSVIVT01020404001 No alias Elongation factor 2 OS=Arabidopsis thaliana 0.04 Archaeplastida
Gb_02896 No alias mRNA-translocation factor (eEF2) 0.03 Archaeplastida
Gb_14897 No alias mRNA-translocation factor (eEF2) 0.04 Archaeplastida
LOC_Os02g32030.1 No alias mRNA-translocation factor (eEF2) 0.04 Archaeplastida
LOC_Os04g02820.1 No alias mRNA-translocation factor (eEF2) 0.05 Archaeplastida
MA_10426758g0010 No alias transcription factor (TUB) 0.03 Archaeplastida
Mp2g20190.1 No alias mRNA-translocation factor (eEF2) 0.04 Archaeplastida
Mp2g20200.1 No alias mRNA-translocation factor (eEF2) 0.04 Archaeplastida
Pp3c11_25350V3.1 No alias Ribosomal protein S5/Elongation factor G/III/V family protein 0.04 Archaeplastida
Pp3c11_25530V3.1 No alias Ribosomal protein S5/Elongation factor G/III/V family protein 0.02 Archaeplastida
Pp3c7_1950V3.1 No alias Ribosomal protein S5/Elongation factor G/III/V family protein 0.02 Archaeplastida
Pp3s128_50V3.1 No alias Ribosomal protein S5/Elongation factor G/III/V family protein 0.05 Archaeplastida
Solyc08g062910.4.1 No alias mRNA-translocation factor (eEF2) 0.05 Archaeplastida
Solyc08g062920.3.1 No alias mRNA-translocation factor (eEF2) 0.06 Archaeplastida
Zm00001e006293_P001 No alias mRNA-translocation factor (eEF2) 0.05 Archaeplastida
Zm00001e006294_P001 No alias mRNA-translocation factor (eEF2) 0.05 Archaeplastida
Zm00001e029078_P002 No alias mRNA-translocation factor (eEF2) 0.13 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003743 translation initiation factor activity IEP Neighborhood
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
CC GO:0005737 cytoplasm IEP Neighborhood
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Neighborhood
BP GO:0006099 tricarboxylic acid cycle IEP Neighborhood
BP GO:0006101 citrate metabolic process IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
BP GO:0006457 protein folding IEP Neighborhood
BP GO:0006886 intracellular protein transport IEP Neighborhood
BP GO:0006904 vesicle docking involved in exocytosis IEP Neighborhood
BP GO:0008104 protein localization IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0008565 protein transporter activity IEP Neighborhood
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Neighborhood
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP Neighborhood
MF GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEP Neighborhood
MF GO:0015020 glucuronosyltransferase activity IEP Neighborhood
BP GO:0015031 protein transport IEP Neighborhood
BP GO:0015833 peptide transport IEP Neighborhood
BP GO:0015977 carbon fixation IEP Neighborhood
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Neighborhood
MF GO:0016874 ligase activity IEP Neighborhood
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Neighborhood
BP GO:0016999 antibiotic metabolic process IEP Neighborhood
BP GO:0022406 membrane docking IEP Neighborhood
CC GO:0030117 membrane coat IEP Neighborhood
CC GO:0030120 vesicle coat IEP Neighborhood
CC GO:0030126 COPI vesicle coat IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0031369 translation initiation factor binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0033036 macromolecule localization IEP Neighborhood
BP GO:0042886 amide transport IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044433 cytoplasmic vesicle part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0044448 cell cortex part IEP Neighborhood
BP GO:0045184 establishment of protein localization IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
BP GO:0048278 vesicle docking IEP Neighborhood
BP GO:0051640 organelle localization IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood
BP GO:0072350 tricarboxylic acid metabolic process IEP Neighborhood
CC GO:0099023 tethering complex IEP Neighborhood
BP GO:0140029 exocytic process IEP Neighborhood
BP GO:0140056 organelle localization by membrane tethering IEP Neighborhood
InterPro domains Description Start Stop
IPR000795 TF_GTP-bd_dom 17 341
IPR004161 EFTu-like_2 393 468
IPR000640 EFG_V-like 725 811
IPR005517 Transl_elong_EFG/EF2_IV 606 721
No external refs found!