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  5. Solyc11g042810.2.1

Solyc11g042810.2.1


Description : AGP beta-1,3-galactosyltransferase


Gene families : OG0000602 (Archaeplastida) Phylogenetic Tree(s): OG0000602_tree ,
OG_05_0000428 (LandPlants) Phylogenetic Tree(s): OG_05_0000428_tree ,
OG_06_0000379 (SeedPlants) Phylogenetic Tree(s): OG_06_0000379_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc11g042810.2.1
Cluster HCCA: Cluster_254

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00171620 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.hydroxyproline-rich... 0.02 Archaeplastida
AMTR_s00099p00123290 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.hydroxyproline-rich... 0.1 Archaeplastida
AT1G22015 DD46 Galactosyltransferase family protein 0.03 Archaeplastida
AT1G33430 No alias Galactosyltransferase family protein 0.16 Archaeplastida
AT2G32430 No alias Galactosyltransferase family protein 0.04 Archaeplastida
GSVIVT01037121001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.1 Archaeplastida
GSVIVT01037664001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.04 Archaeplastida
Gb_07256 No alias AGP beta-1,3-galactosyltransferase 0.03 Archaeplastida
Gb_27977 No alias AGP beta-1,3-galactosyltransferase 0.03 Archaeplastida
Gb_30328 No alias AGP beta-1,3-galactosyltransferase 0.03 Archaeplastida
LOC_Os01g65590.1 No alias AGP beta-1,3-galactosyltransferase 0.11 Archaeplastida
LOC_Os05g35266.1 No alias AGP beta-1,3-galactosyltransferase 0.07 Archaeplastida
LOC_Os08g02370.1 No alias AGP beta-1,3-galactosyltransferase 0.05 Archaeplastida
MA_95800g0010 No alias AGP beta-1,3-galactosyltransferase 0.03 Archaeplastida
Zm00001e012498_P003 No alias AGP beta-1,3-galactosyltransferase 0.02 Archaeplastida
Zm00001e028632_P001 No alias AGP beta-1,3-galactosyltransferase 0.05 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0006486 protein glycosylation IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004252 serine-type endopeptidase activity IEP Neighborhood
MF GO:0004518 nuclease activity IEP Neighborhood
MF GO:0004519 endonuclease activity IEP Neighborhood
MF GO:0004521 endoribonuclease activity IEP Neighborhood
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP Neighborhood
MF GO:0004540 ribonuclease activity IEP Neighborhood
MF GO:0008134 transcription factor binding IEP Neighborhood
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0016840 carbon-nitrogen lyase activity IEP Neighborhood
MF GO:0016843 amine-lyase activity IEP Neighborhood
MF GO:0016844 strictosidine synthase activity IEP Neighborhood
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Neighborhood
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Neighborhood
MF GO:0017025 TBP-class protein binding IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR002659 Glyco_trans_31 141 336
IPR025298 DUF4094 9 105
No external refs found!