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  5. AMTR_s00032p00149770

AMTR_s00032p00149770 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00032.116

Description : Protein modification.protein folding and quality control.protein folding catalyst activities.Cyclophilin protein folding catalyst


Gene families : OG0003803 (Archaeplastida) Phylogenetic Tree(s): OG0003803_tree ,
OG_05_0003806 (LandPlants) Phylogenetic Tree(s): OG_05_0003806_tree ,
OG_06_0004142 (SeedPlants) Phylogenetic Tree(s): OG_06_0004142_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00032p00149770
Cluster HCCA: Cluster_78

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001042.31 No alias Protein modification.protein folding and quality... 0.02 Archaeplastida
Mp5g22800.1 No alias protein folding catalyst 0.03 Archaeplastida
Pp3c1_5600V3.1 No alias cyclophilin 59 0.03 Archaeplastida
Solyc07g066420.4.1 No alias protein folding catalyst 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEA Interproscan
BP GO:0006457 protein folding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Neighborhood
CC GO:0005667 transcription factor complex IEP Neighborhood
CC GO:0005669 transcription factor TFIID complex IEP Neighborhood
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Neighborhood
MF GO:0017056 structural constituent of nuclear pore IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
CC GO:0044798 nuclear transcription factor complex IEP Neighborhood
CC GO:0090575 RNA polymerase II transcription factor complex IEP Neighborhood
InterPro domains Description Start Stop
IPR001878 Znf_CCHC 273 288
IPR002130 Cyclophilin-type_PPIase_dom 11 93
IPR000504 RRM_dom 178 248
No external refs found!