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  5. Solyc11g064800.3.1

Solyc11g064800.3.1


Description : transcription factor (SRS)


Gene families : OG0001199 (Archaeplastida) Phylogenetic Tree(s): OG0001199_tree ,
OG_05_0000755 (LandPlants) Phylogenetic Tree(s): OG_05_0000755_tree ,
OG_06_0000578 (SeedPlants) Phylogenetic Tree(s): OG_06_0000578_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc11g064800.3.1
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00223800 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.SRS... 0.05 Archaeplastida
AT2G18120 SRS4 SHI-related sequence 4 0.04 Archaeplastida
AT5G12330 LRP1 Lateral root primordium (LRP) protein-related 0.04 Archaeplastida
GSVIVT01009812001 No alias RNA biosynthesis.transcriptional activation.SRS... 0.04 Archaeplastida
GSVIVT01013486001 No alias RNA biosynthesis.transcriptional activation.SRS... 0.04 Archaeplastida
GSVIVT01037267001 No alias RNA biosynthesis.transcriptional activation.SRS... 0.04 Archaeplastida
Gb_11822 No alias transcription factor (SRS) 0.04 Archaeplastida
LOC_Os08g43410.1 No alias transcription factor (SRS) 0.06 Archaeplastida
Mp3g19510.1 No alias transcription factor (SRS) 0.03 Archaeplastida
Zm00001e004006_P001 No alias transcription factor (SRS) 0.06 Archaeplastida
Zm00001e010227_P001 No alias transcription factor (SRS) 0.04 Archaeplastida
Zm00001e013256_P002 No alias transcription factor (SRS) 0.04 Archaeplastida
Zm00001e024681_P001 No alias transcription factor (SRS) 0.07 Archaeplastida
Zm00001e026854_P001 No alias transcription factor (SRS) 0.04 Archaeplastida
Zm00001e028304_P001 No alias transcription factor (SRS) 0.05 Archaeplastida
Zm00001e030189_P001 No alias transcription factor (SRS) 0.04 Archaeplastida
Zm00001e031567_P001 No alias transcription factor (SRS) 0.05 Archaeplastida
Zm00001e034798_P001 No alias transcription factor (SRS) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!