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  5. Solyc11g072030.3.1

Solyc11g072030.3.1


Description : xylogen-type arabinogalactan protein


Gene families : OG0000162 (Archaeplastida) Phylogenetic Tree(s): OG0000162_tree ,
OG_05_0000065 (LandPlants) Phylogenetic Tree(s): OG_05_0000065_tree ,
OG_06_0007005 (SeedPlants) Phylogenetic Tree(s): OG_06_0007005_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc11g072030.3.1
Cluster HCCA: Cluster_261

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00240480 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.hydroxyproline-rich...
  		•  0.02 Archaeplastida
    AMTR_s00002p00272110 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
    AMTR_s00002p00272120 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.hydroxyproline-rich... 0.02 Archaeplastida
    AMTR_s00119p00120480 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.hydroxyproline-rich... 0.02 Archaeplastida
    AMTR_s01773p00009760 evm_27.TU.AmTr_v1... No description available 0.05 Archaeplastida
    AT1G05450 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 Archaeplastida
    AT1G55260 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.06 Archaeplastida
    AT1G73890 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 Archaeplastida
    AT2G27130 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 Archaeplastida
    AT2G48140 EDA4 Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 Archaeplastida
    AT3G22600 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 Archaeplastida
    AT3G43720 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.1 Archaeplastida
    AT3G58550 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 Archaeplastida
    AT4G14815 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 Archaeplastida
    GSVIVT01001178001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.03 Archaeplastida
    GSVIVT01001181001 No alias No description available 0.03 Archaeplastida
    GSVIVT01008272001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.03 Archaeplastida
    GSVIVT01018008001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.03 Archaeplastida
    GSVIVT01018010001 No alias No description available 0.03 Archaeplastida
    GSVIVT01025413001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.05 Archaeplastida
    Gb_01917 No alias classical arabinogalactan protein 0.03 Archaeplastida
    Gb_02441 No alias xylogen-type arabinogalactan protein 0.03 Archaeplastida
    Gb_02443 No alias xylogen-type arabinogalactan protein 0.03 Archaeplastida
    Gb_02455 No alias xylogen-type arabinogalactan protein 0.03 Archaeplastida
    Gb_02458 No alias xylogen-type arabinogalactan protein 0.03 Archaeplastida
    Gb_06123 No alias no hits & (original description: none) 0.03 Archaeplastida
    Gb_06428 No alias xylogen-type arabinogalactan protein 0.02 Archaeplastida
    Gb_08579 No alias xylogen-type arabinogalactan protein 0.03 Archaeplastida
    Gb_24349 No alias xylogen-type arabinogalactan protein 0.04 Archaeplastida
    LOC_Os01g59870.1 No alias xylogen-type arabinogalactan protein 0.05 Archaeplastida
    LOC_Os03g57970.2 No alias xylogen-type arabinogalactan protein 0.03 Archaeplastida
    LOC_Os03g57980.1 No alias no hits & (original description: none) 0.03 Archaeplastida
    LOC_Os03g58940.1 No alias xylogen-type arabinogalactan protein 0.09 Archaeplastida
    LOC_Os07g07860.1 No alias xylogen-type arabinogalactan protein 0.07 Archaeplastida
    LOC_Os07g07930.1 No alias xylogen-type arabinogalactan protein 0.03 Archaeplastida
    MA_113140g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
    MA_115537g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
    MA_124502g0010 No alias xylogen-type arabinogalactan protein 0.03 Archaeplastida
    MA_19325g0010 No alias xylogen-type arabinogalactan protein 0.03 Archaeplastida
    MA_383975g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
    MA_494876g0010 No alias xylogen-type arabinogalactan protein 0.03 Archaeplastida
    MA_50191g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
    MA_5581g0010 No alias xylogen-type arabinogalactan protein 0.07 Archaeplastida
    MA_64802g0020 No alias no hits & (original description: none) 0.04 Archaeplastida
    Pp3c11_11470V3.1 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.02 Archaeplastida
    Pp3c19_17730V3.1 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.02 Archaeplastida
    Pp3c1_11030V3.1 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 Archaeplastida
    Pp3c2_6280V3.1 No alias glycosylphosphatidylinositol-anchored lipid protein transfer 1 0.04 Archaeplastida
    Solyc03g005200.3.1 No alias xylogen-type arabinogalactan protein 0.03 Archaeplastida
    Solyc03g005210.4.1 No alias no hits & (original description: none) 0.03 Archaeplastida
    Solyc06g054030.2.1 No alias xylogen-type arabinogalactan protein 0.03 Archaeplastida
    Solyc06g054060.1.1 No alias xylogen-type arabinogalactan protein 0.04 Archaeplastida
    Solyc09g065410.4.1 No alias xylogen-type arabinogalactan protein 0.04 Archaeplastida
    Solyc09g065430.4.1 No alias xylogen-type arabinogalactan protein 0.04 Archaeplastida
    Solyc09g082290.3.1 No alias no hits & (original description: none) 0.04 Archaeplastida
    Solyc09g082300.3.1 No alias no hits & (original description: none) 0.04 Archaeplastida
    Zm00001e000506_P001 No alias xylogen-type arabinogalactan protein 0.03 Archaeplastida
    Zm00001e005336_P001 No alias xylogen-type arabinogalactan protein 0.03 Archaeplastida
    Zm00001e005959_P003 No alias xylogen-type arabinogalactan protein 0.05 Archaeplastida
    Zm00001e005961_P001 No alias xylogen-type arabinogalactan protein 0.03 Archaeplastida
    Zm00001e006054_P001 No alias xylogen-type arabinogalactan protein 0.03 Archaeplastida
    Zm00001e011883_P002 No alias xylogen-type arabinogalactan protein 0.02 Archaeplastida
    Zm00001e028880_P001 No alias xylogen-type arabinogalactan protein 0.09 Archaeplastida
    Zm00001e032912_P001 No alias no hits & (original description: none) 0.04 Archaeplastida

    Type GO Term Name Evidence Source

    No GO annotation available for this sequence
    Toggle parental
    Type GO Term Name Evidence Source
    MF GO:0003824 catalytic activity IEP Neighborhood
    BP GO:0006082 organic acid metabolic process IEP Neighborhood
    BP GO:0006359 regulation of transcription by RNA polymerase III IEP Neighborhood
    BP GO:0006629 lipid metabolic process IEP Neighborhood
    BP GO:0006631 fatty acid metabolic process IEP Neighborhood
    BP GO:0006633 fatty acid biosynthetic process IEP Neighborhood
    BP GO:0008610 lipid biosynthetic process IEP Neighborhood
    BP GO:0009719 response to endogenous stimulus IEP Neighborhood
    BP GO:0009725 response to hormone IEP Neighborhood
    BP GO:0009733 response to auxin IEP Neighborhood
    BP GO:0009890 negative regulation of biosynthetic process IEP Neighborhood
    BP GO:0009892 negative regulation of metabolic process IEP Neighborhood
    BP GO:0010033 response to organic substance IEP Neighborhood
    BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP Neighborhood
    BP GO:0010605 negative regulation of macromolecule metabolic process IEP Neighborhood
    BP GO:0010629 negative regulation of gene expression IEP Neighborhood
    CC GO:0016020 membrane IEP Neighborhood
    BP GO:0016053 organic acid biosynthetic process IEP Neighborhood
    BP GO:0016480 negative regulation of transcription by RNA polymerase III IEP Neighborhood
    MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
    MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
    MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
    MF GO:0016872 intramolecular lyase activity IEP Neighborhood
    BP GO:0019752 carboxylic acid metabolic process IEP Neighborhood
    BP GO:0031324 negative regulation of cellular metabolic process IEP Neighborhood
    BP GO:0031327 negative regulation of cellular biosynthetic process IEP Neighborhood
    BP GO:0032787 monocarboxylic acid metabolic process IEP Neighborhood
    BP GO:0042221 response to chemical IEP Neighborhood
    BP GO:0043436 oxoacid metabolic process IEP Neighborhood
    BP GO:0044255 cellular lipid metabolic process IEP Neighborhood
    BP GO:0044281 small molecule metabolic process IEP Neighborhood
    BP GO:0044283 small molecule biosynthetic process IEP Neighborhood
    BP GO:0045892 negative regulation of transcription, DNA-templated IEP Neighborhood
    BP GO:0045934 negative regulation of nucleobase-containing compound metabolic process IEP Neighborhood
    BP GO:0046394 carboxylic acid biosynthetic process IEP Neighborhood
    BP GO:0048523 negative regulation of cellular process IEP Neighborhood
    BP GO:0050896 response to stimulus IEP Neighborhood
    BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP Neighborhood
    BP GO:0051253 negative regulation of RNA metabolic process IEP Neighborhood
    BP GO:0072330 monocarboxylic acid biosynthetic process IEP Neighborhood
    BP GO:1902679 negative regulation of RNA biosynthetic process IEP Neighborhood
    BP GO:1903507 negative regulation of nucleic acid-templated transcription IEP Neighborhood
    BP GO:2000113 negative regulation of cellular macromolecule biosynthetic process IEP Neighborhood
    InterPro domains Description Start Stop
    IPR016140 Bifunc_inhib/LTP/seed_store 47 134
    No external refs found!