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  5. Solyc11g072600.3.1

Solyc11g072600.3.1


Description : transcription factor (AP2)


Gene families : OG0000068 (Archaeplastida) Phylogenetic Tree(s): OG0000068_tree ,
OG_05_0000603 (LandPlants) Phylogenetic Tree(s): OG_05_0000603_tree ,
OG_06_0000543 (SeedPlants) Phylogenetic Tree(s): OG_06_0000543_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc11g072600.3.1
Cluster HCCA: Cluster_42

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00086450 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 Archaeplastida
AMTR_s00019p00225230 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
AMTR_s00058p00216470 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
AT1G51190 PLT2 Integrase-type DNA-binding superfamily protein 0.04 Archaeplastida
AT3G54320 WRI1, ATWRI1, ASML1, WRI Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
AT5G17430 BBM Integrase-type DNA-binding superfamily protein 0.05 Archaeplastida
GSVIVT01004382001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
GSVIVT01007388001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 Archaeplastida
GSVIVT01016352001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.05 Archaeplastida
Gb_05487 No alias transcription factor (AP2) 0.03 Archaeplastida
Gb_11937 No alias transcription factor (AP2) 0.03 Archaeplastida
Gb_18139 No alias transcription factor (AP2) 0.03 Archaeplastida
Gb_39931 No alias transcription factor (AP2) 0.03 Archaeplastida
LOC_Os06g05340.1 No alias transcription factor (AP2). RAM1-dependent transcription... 0.04 Archaeplastida
LOC_Os11g03540.1 No alias transcription factor (AP2) 0.02 Archaeplastida
Pp3c23_13360V3.1 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
Solyc01g096860.3.1 No alias transcription factor (AP2) 0.03 Archaeplastida
Solyc09g007260.4.1 No alias transcription factor (AP2) 0.05 Archaeplastida
Solyc11g061750.2.1 No alias transcription factor (AP2) 0.03 Archaeplastida
Zm00001e006752_P001 No alias transcription factor (AP2) 0.04 Archaeplastida
Zm00001e011539_P001 No alias transcription factor (AP2) 0.02 Archaeplastida
Zm00001e011951_P001 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e037501_P005 No alias transcription factor (AP2) 0.04 Archaeplastida
Zm00001e037696_P002 No alias transcription factor (AP2) 0.03 Archaeplastida
Zm00001e038652_P002 No alias transcription factor (AP2) 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 159 208
No external refs found!