1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc11g073020.3.1

Solyc11g073020.3.1


Description : Protein SODIUM POTASSIUM ROOT DEFECTIVE 2 OS=Arabidopsis thaliana (sp|q58fz0|nakr2_arath : 114.0)


Gene families : OG0000049 (Archaeplastida) Phylogenetic Tree(s): OG0000049_tree ,
OG_05_0000136 (LandPlants) Phylogenetic Tree(s): OG_05_0000136_tree ,
OG_06_0000808 (SeedPlants) Phylogenetic Tree(s): OG_06_0000808_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc11g073020.3.1
Cluster HCCA: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00147000 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s00005p00265500 evm_27.TU.AmTr_v1... Heavy metal-associated isoprenylated plant protein 22... 0.04 Archaeplastida
AMTR_s00005p00268350 evm_27.TU.AmTr_v1... Heavy metal-associated isoprenylated plant protein 37... 0.04 Archaeplastida
AMTR_s00010p00210890 evm_27.TU.AmTr_v1... Protein SODIUM POTASSIUM ROOT DEFECTIVE 1 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00010p00214870 evm_27.TU.AmTr_v1... Heavy metal-associated isoprenylated plant protein 23... 0.03 Archaeplastida
AMTR_s00016p00251970 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AT1G06330 No alias Heavy metal transport/detoxification superfamily protein 0.03 Archaeplastida
AT1G23000 No alias Heavy metal transport/detoxification superfamily protein 0.03 Archaeplastida
AT1G30473 No alias Heavy metal transport/detoxification superfamily protein 0.04 Archaeplastida
AT1G71050 HIPP20 Heavy metal transport/detoxification superfamily protein 0.02 Archaeplastida
AT2G28660 No alias Chloroplast-targeted copper chaperone protein 0.03 Archaeplastida
AT3G06130 No alias Heavy metal transport/detoxification superfamily protein 0.03 Archaeplastida
AT3G48970 No alias Heavy metal transport/detoxification superfamily protein 0.02 Archaeplastida
AT3G56240 CCH copper chaperone 0.03 Archaeplastida
AT4G23882 No alias Heavy metal transport/detoxification superfamily protein 0.03 Archaeplastida
AT4G38580 HIPP26, FP6, ATFP6 farnesylated protein 6 0.07 Archaeplastida
AT4G39700 No alias Heavy metal transport/detoxification superfamily protein 0.05 Archaeplastida
AT5G02600 NAKR1 Heavy metal transport/detoxification superfamily protein 0.03 Archaeplastida
AT5G05365 No alias Heavy metal transport/detoxification superfamily protein 0.03 Archaeplastida
AT5G17450 HIPP21 Heavy metal transport/detoxification superfamily protein 0.03 Archaeplastida
AT5G19090 No alias Heavy metal transport/detoxification superfamily protein 0.03 Archaeplastida
GSVIVT01000021001 No alias Heavy metal-associated isoprenylated plant protein 32... 0.03 Archaeplastida
GSVIVT01017753001 No alias Heavy metal-associated isoprenylated plant protein 36... 0.03 Archaeplastida
GSVIVT01027966001 No alias Heavy metal-associated isoprenylated plant protein 36... 0.05 Archaeplastida
GSVIVT01032731001 No alias No description available 0.04 Archaeplastida
Gb_00188 No alias Heavy metal-associated isoprenylated plant protein 20... 0.03 Archaeplastida
Gb_20919 No alias Heavy metal-associated isoprenylated plant protein 23... 0.03 Archaeplastida
Gb_20921 No alias Heavy metal-associated isoprenylated plant protein 23... 0.02 Archaeplastida
Gb_20922 No alias Heavy metal-associated isoprenylated plant protein 23... 0.03 Archaeplastida
Gb_33825 No alias copper chaperone (CCH) 0.03 Archaeplastida
LOC_Os03g02860.1 No alias Heavy metal-associated isoprenylated plant protein 30... 0.03 Archaeplastida
LOC_Os03g06080.1 No alias Heavy metal-associated isoprenylated plant protein 27... 0.05 Archaeplastida
LOC_Os03g22490.1 No alias no hits & (original description: none) 0.07 Archaeplastida
MA_10428986g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_150983g0010 No alias Heavy metal-associated isoprenylated plant protein 26... 0.04 Archaeplastida
MA_175196g0010 No alias Heavy metal-associated isoprenylated plant protein 45... 0.03 Archaeplastida
MA_20279g0010 No alias Heavy metal-associated isoprenylated plant protein 23... 0.03 Archaeplastida
MA_40458g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_525649g0010 No alias Protein SODIUM POTASSIUM ROOT DEFECTIVE 1 OS=Arabidopsis... 0.03 Archaeplastida
MA_8538384g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_9120066g0010 No alias Heavy metal-associated isoprenylated plant protein 45... 0.03 Archaeplastida
Pp3c14_1600V3.1 No alias Heavy metal transport/detoxification superfamily protein 0.02 Archaeplastida
Smo29653 No alias No description available 0.03 Archaeplastida
Solyc01g098760.4.1 No alias Heavy metal-associated isoprenylated plant protein 33... 0.05 Archaeplastida
Solyc02g091300.3.1 No alias Heavy metal-associated isoprenylated plant protein 20... 0.05 Archaeplastida
Solyc04g007630.2.1 No alias Heavy metal-associated isoprenylated plant protein 20... 0.05 Archaeplastida
Solyc06g050710.4.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc07g055010.3.1 No alias Heavy metal-associated isoprenylated plant protein 28... 0.03 Archaeplastida
Zm00001e003565_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e006177_P001 No alias Protein SODIUM POTASSIUM ROOT DEFECTIVE 1 OS=Arabidopsis... 0.07 Archaeplastida
Zm00001e008507_P003 No alias Heavy metal-associated isoprenylated plant protein 27... 0.03 Archaeplastida
Zm00001e009740_P001 No alias Heavy metal-associated isoprenylated plant protein 23... 0.03 Archaeplastida
Zm00001e014316_P002 No alias Heavy metal-associated isoprenylated plant protein 32... 0.03 Archaeplastida
Zm00001e015864_P001 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e019945_P001 No alias Protein SODIUM POTASSIUM ROOT DEFECTIVE 2 OS=Arabidopsis... 0.03 Archaeplastida
Zm00001e027825_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e029729_P001 No alias Heavy metal-associated isoprenylated plant protein 36... 0.05 Archaeplastida
Zm00001e038214_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e039336_P002 No alias Heavy metal-associated isoprenylated plant protein 32... 0.05 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0030001 metal ion transport IEA Interproscan
MF GO:0046872 metal ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004252 serine-type endopeptidase activity IEP Neighborhood
MF GO:0004650 polygalacturonase activity IEP Neighborhood
BP GO:0006066 alcohol metabolic process IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
MF GO:0010181 FMN binding IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0016311 dephosphorylation IEP Neighborhood
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0019751 polyol metabolic process IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0043647 inositol phosphate metabolic process IEP Neighborhood
BP GO:0044282 small molecule catabolic process IEP Neighborhood
BP GO:0046164 alcohol catabolic process IEP Neighborhood
BP GO:0046174 polyol catabolic process IEP Neighborhood
BP GO:0046434 organophosphate catabolic process IEP Neighborhood
BP GO:0046838 phosphorylated carbohydrate dephosphorylation IEP Neighborhood
BP GO:0046855 inositol phosphate dephosphorylation IEP Neighborhood
MF GO:0050662 coenzyme binding IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
BP GO:0071545 inositol phosphate catabolic process IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1901615 organic hydroxy compound metabolic process IEP Neighborhood
BP GO:1901616 organic hydroxy compound catabolic process IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR006121 HMA_dom 177 223
No external refs found!