Solyc12g007070.2.1

Description : transcription factor (HSF)

Gene families : OG0000090 (Archaeplastida) Phylogenetic Tree(s): OG0000090_tree ,
OG_05_0000053 (LandPlants) Phylogenetic Tree(s): OG_05_0000053_tree ,
OG_06_0000104 (SeedPlants) Phylogenetic Tree(s): OG_06_0000104_tree

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc12g007070.2.1
Cluster	HCCA: Cluster_76

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00036p00115830	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.HSF (heat...	0.02	Archaeplastida
AMTR_s00048p00075850	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.HSF (heat...	0.01	Archaeplastida
AMTR_s00069p00068180	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.HSF (heat...	0.01	Archaeplastida
AT2G41690	AT-HSFB3, HSFB3	heat shock transcription factor B3	0.06	Archaeplastida
AT3G22830	AT-HSFA6B, HSFA6B	heat shock transcription factor A6B	0.03	Archaeplastida
AT4G11660	AT-HSFB2B, HSFB2B	winged-helix DNA-binding transcription factor family protein	0.01	Archaeplastida
AT5G03720	HSFA3, AT-HSFA3	heat shock transcription factor A3	0.02	Archaeplastida
GSVIVT01002066001	No alias	RNA biosynthesis.transcriptional activation.HSF (heat...	0.02	Archaeplastida
GSVIVT01015389001	No alias	RNA biosynthesis.transcriptional activation.HSF (heat...	0.11	Archaeplastida
GSVIVT01021269001	No alias	RNA biosynthesis.transcriptional activation.HSF (heat...	0.03	Archaeplastida
GSVIVT01033257001	No alias	RNA biosynthesis.transcriptional activation.HSF (heat...	0.01	Archaeplastida
LOC_Os06g22610.1	No alias	Heat stress transcription factor A-2a OS=Oryza sativa...	0.2	Archaeplastida
LOC_Os09g28200.1	No alias	transcription factor (HSF)	0.02	Archaeplastida
MA_113508g0010	No alias	transcription factor (HSF)	0.02	Archaeplastida
MA_13910g0010	No alias	transcription factor (HSF)	0.05	Archaeplastida
MA_8812600g0010	No alias	transcription factor (HSF)	0.01	Archaeplastida
MA_8845456g0010	No alias	transcription factor (HSF)	0.02	Archaeplastida
MpVg00470.1	No alias	No annotation	0.05	Archaeplastida
Solyc02g072000.3.1	No alias	transcription factor (HSF)	0.03	Archaeplastida
Solyc10g079380.2.1	No alias	transcription factor (HSF)	0.04	Archaeplastida
Solyc12g098520.2.1	No alias	transcription factor (HSF)	0.02	Archaeplastida
Zm00001e014583_P001	No alias	transcription factor (HSF)	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0033643	host cell part	None	Extended
CC	GO:0033646	host intracellular part	None	Extended
CC	GO:0033647	host intracellular organelle	None	Extended
CC	GO:0033648	host intracellular membrane-bounded organelle	None	Extended
CC	GO:0042025	host cell nucleus	IEA	Interproscan
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
CC	GO:0044217	other organism part	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0004601	peroxidase activity	IEP	Neighborhood
BP	GO:0006950	response to stress	IEP	Neighborhood
BP	GO:0006979	response to oxidative stress	IEP	Neighborhood
BP	GO:0008152	metabolic process	IEP	Neighborhood
MF	GO:0016209	antioxidant activity	IEP	Neighborhood
MF	GO:0016684	oxidoreductase activity, acting on peroxide as acceptor	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR000232	HSF_DNA-bd	10	99

External Links

No external refs found!

Solyc12g007070.2.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation