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  5. Solyc12g009250.3.1

Solyc12g009250.3.1


Description : no hits & (original description: none)


Gene families : OG0002206 (Archaeplastida) Phylogenetic Tree(s): OG0002206_tree ,
OG_05_0002586 (LandPlants) Phylogenetic Tree(s): OG_05_0002586_tree ,
OG_06_0003596 (SeedPlants) Phylogenetic Tree(s): OG_06_0003596_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g009250.3.1
Cluster HCCA: Cluster_119

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00267680 evm_27.TU.AmTr_v1... External stimuli response.temperature.Hsp... 0.03 Archaeplastida
AT5G20720 CPN21, ATCPN21,... chaperonin 20 0.11 Archaeplastida
Cre08.g358562 No alias External stimuli response.temperature.Hsp... 0.03 Archaeplastida
Cre12.g505850 No alias External stimuli response.temperature.Hsp... 0.05 Archaeplastida
GSVIVT01008295001 No alias External stimuli response.temperature.Hsp... 0.1 Archaeplastida
GSVIVT01015036001 No alias External stimuli response.temperature.Hsp... 0.03 Archaeplastida
Gb_18360 No alias CPN20 auxiliary co-chaperone involved in RuBisCo... 0.06 Archaeplastida
LOC_Os02g54060.1 No alias CPN20 auxiliary co-chaperone involved in RuBisCo... 0.05 Archaeplastida
LOC_Os06g09679.1 No alias CPN20 auxiliary co-chaperone involved in RuBisCo... 0.06 Archaeplastida
Mp1g10690.1 No alias CPN20 auxiliary co-chaperone involved in RuBisCo... 0.13 Archaeplastida
Pp3c22_7570V3.1 No alias chaperonin 20 0.03 Archaeplastida
Smo270691 No alias External stimuli response.temperature.Hsp... 0.02 Archaeplastida
Zm00001e009881_P001 No alias CPN20 auxiliary co-chaperone involved in RuBisCo... 0.16 Archaeplastida
Zm00001e036248_P001 No alias CPN20 auxiliary co-chaperone involved in RuBisCo... 0.07 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Neighborhood
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0000774 adenyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Neighborhood
MF GO:0004019 adenylosuccinate synthase activity IEP Neighborhood
MF GO:0004418 hydroxymethylbilane synthase activity IEP Neighborhood
MF GO:0004655 porphobilinogen synthase activity IEP Neighborhood
MF GO:0004784 superoxide dismutase activity IEP Neighborhood
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP Neighborhood
BP GO:0006066 alcohol metabolic process IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0006778 porphyrin-containing compound metabolic process IEP Neighborhood
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Neighborhood
BP GO:0006801 superoxide metabolic process IEP Neighborhood
MF GO:0008173 RNA methyltransferase activity IEP Neighborhood
MF GO:0008483 transaminase activity IEP Neighborhood
BP GO:0009058 biosynthetic process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP Neighborhood
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Neighborhood
MF GO:0016829 lyase activity IEP Neighborhood
MF GO:0016836 hydro-lyase activity IEP Neighborhood
MF GO:0016853 isomerase activity IEP Neighborhood
MF GO:0016859 cis-trans isomerase activity IEP Neighborhood
MF GO:0016874 ligase activity IEP Neighborhood
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
BP GO:0018130 heterocycle biosynthetic process IEP Neighborhood
BP GO:0019438 aromatic compound biosynthetic process IEP Neighborhood
BP GO:0019637 organophosphate metabolic process IEP Neighborhood
BP GO:0019751 polyol metabolic process IEP Neighborhood
BP GO:0033013 tetrapyrrole metabolic process IEP Neighborhood
BP GO:0033014 tetrapyrrole biosynthetic process IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
MF GO:0042802 identical protein binding IEP Neighborhood
MF GO:0042803 protein homodimerization activity IEP Neighborhood
BP GO:0043647 inositol phosphate metabolic process IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044249 cellular biosynthetic process IEP Neighborhood
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Neighborhood
BP GO:0044281 small molecule metabolic process IEP Neighborhood
BP GO:0044282 small molecule catabolic process IEP Neighborhood
BP GO:0046164 alcohol catabolic process IEP Neighborhood
BP GO:0046174 polyol catabolic process IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
BP GO:0046838 phosphorylated carbohydrate dephosphorylation IEP Neighborhood
BP GO:0046855 inositol phosphate dephosphorylation IEP Neighborhood
MF GO:0051087 chaperone binding IEP Neighborhood
MF GO:0060590 ATPase regulator activity IEP Neighborhood
BP GO:0071545 inositol phosphate catabolic process IEP Neighborhood
BP GO:0072593 reactive oxygen species metabolic process IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
BP GO:1901362 organic cyclic compound biosynthetic process IEP Neighborhood
BP GO:1901566 organonitrogen compound biosynthetic process IEP Neighborhood
BP GO:1901576 organic substance biosynthetic process IEP Neighborhood
BP GO:1901616 organic hydroxy compound catabolic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!