Solyc12g009260.3.1


Description : no hits & (original description: none)


Gene families : OG0000464 (Archaeplastida) Phylogenetic Tree(s): OG0000464_tree ,
OG_05_0002934 (LandPlants) Phylogenetic Tree(s): OG_05_0002934_tree ,
OG_06_0003903 (SeedPlants) Phylogenetic Tree(s): OG_06_0003903_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g009260.3.1
Cluster HCCA: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00265100 evm_27.TU.AmTr_v1... Lipid metabolism.fatty acid synthesis.plastidial Type II... 0.03 Archaeplastida
AMTR_s00021p00221400 evm_27.TU.AmTr_v1... Lipid metabolism.fatty acid synthesis.plastidial Type II... 0.02 Archaeplastida
Gb_06836 No alias ketoacyl-ACP synthase I 0.02 Archaeplastida
Gb_06837 No alias ketoacyl-ACP synthase I 0.04 Archaeplastida
Gb_11724 No alias ketoacyl-ACP synthase I 0.03 Archaeplastida
Gb_11725 No alias 3-oxoacyl-[acyl-carrier-protein] synthase I,... 0.03 Archaeplastida
Gb_15076 No alias ketoacyl-ACP synthase I 0.03 Archaeplastida
Gb_23277 No alias ketoacyl-ACP synthase I 0.04 Archaeplastida
MA_10434257g0010 No alias 3-oxoacyl-[acyl-carrier-protein] synthase I,... 0.02 Archaeplastida
MA_127500g0010 No alias 3-oxoacyl-[acyl-carrier-protein] synthase I,... 0.04 Archaeplastida
MA_326409g0010 No alias 3-oxoacyl-[acyl-carrier-protein] synthase I,... 0.05 Archaeplastida
MA_49129g0020 No alias 3-oxoacyl-[acyl-carrier-protein] synthase I,... 0.02 Archaeplastida
Pp3c13_8990V3.1 No alias 3-ketoacyl-acyl carrier protein synthase I 0.02 Archaeplastida
Pp3c26_4590V3.1 No alias fatty acid biosynthesis 1 0.02 Archaeplastida
Zm00001e035553_P001 No alias ketoacyl-ACP synthase II 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
BP GO:0006952 defense response IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
MF GO:0008171 O-methyltransferase activity IEP Neighborhood
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
MF GO:0010333 terpene synthase activity IEP Neighborhood
MF GO:0016289 CoA hydrolase activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016790 thiolester hydrolase activity IEP Neighborhood
MF GO:0016829 lyase activity IEP Neighborhood
MF GO:0016835 carbon-oxygen lyase activity IEP Neighborhood
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Neighborhood
MF GO:0016887 ATPase activity IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!