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  4. Sequence
  5. Solyc12g010470.3.1

Solyc12g010470.3.1


Description : no hits & (original description: none)


Gene families : OG0000197 (Archaeplastida) Phylogenetic Tree(s): OG0000197_tree ,
OG_05_0000880 (LandPlants) Phylogenetic Tree(s): OG_05_0000880_tree ,
OG_06_0001431 (SeedPlants) Phylogenetic Tree(s): OG_06_0001431_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g010470.3.1
Cluster HCCA: Cluster_78

Target Alias Description ECC score BPGene Family Method Actions
AMTR_s00002p00211460 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.PLATZ... 0.03 Archaeplastida
AMTR_s00008p00208550 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.PLATZ... 0.04 Archaeplastida
AMTR_s00032p00241350 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.PLATZ... 0.04 Archaeplastida
AMTR_s00033p00166000 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.PLATZ... 0.06 Archaeplastida
AT1G32700 No alias PLATZ transcription factor family protein 0.03 Archaeplastida
AT2G12646 No alias PLATZ transcription factor family protein 0.16 Archaeplastida
AT3G60670 No alias PLATZ transcription factor family protein 0.03 Archaeplastida
AT5G46710 No alias PLATZ transcription factor family protein 0.01 Archaeplastida
Cre02.g095950 No alias RNA biosynthesis.transcriptional activation.PLATZ... 0.01 Archaeplastida
GSVIVT01001279001 No alias RNA biosynthesis.transcriptional activation.PLATZ... 0.06 Archaeplastida
GSVIVT01012869001 No alias RNA biosynthesis.transcriptional activation.PLATZ... 0.05 Archaeplastida
GSVIVT01013149001 No alias RNA biosynthesis.transcriptional activation.PLATZ... 0.03 Archaeplastida
GSVIVT01031446001 No alias RNA biosynthesis.transcriptional activation.PLATZ... 0.05 Archaeplastida
Gb_32018 No alias transcription factor (PLATZ) 0.03 Archaeplastida
LOC_Os02g07650.1 No alias transcription factor (PLATZ) 0.04 Archaeplastida
LOC_Os02g09070.1 No alias transcription factor (PLATZ) 0.12 Archaeplastida
LOC_Os04g50120.1 No alias transcription factor (PLATZ) 0.04 Archaeplastida
LOC_Os06g41930.2 No alias transcription factor (PLATZ) 0.03 Archaeplastida
MA_10310g0010 No alias transcription factor (PLATZ) 0.04 Archaeplastida
MA_12209g0020 No alias transcription factor (PLATZ) 0.03 Archaeplastida
MA_8256450g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_9760264g0010 No alias transcription factor (PLATZ) 0.02 Archaeplastida
Pp3c18_12270V3.1 No alias PLATZ transcription factor family protein 0.02 Archaeplastida
Pp3c3_3180V3.1 No alias PLATZ transcription factor family protein 0.02 Archaeplastida
Pp3c4_30530V3.1 No alias PLATZ transcription factor family protein 0.02 Archaeplastida
Solyc08g005100.3.1 No alias transcription factor (PLATZ) 0.04 Archaeplastida
Solyc08g076860.3.1 No alias transcription factor (PLATZ) 0.04 Archaeplastida
Zm00001e013748_P001 No alias transcription factor (PLATZ) 0.03 Archaeplastida
Zm00001e013865_P001 No alias transcription factor (PLATZ) 0.13 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004650 polygalacturonase activity IEP Neighborhood
MF GO:0004857 enzyme inhibitor activity IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
MF GO:0008146 sulfotransferase activity IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
MF GO:0030234 enzyme regulator activity IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
MF GO:0030247 polysaccharide binding IEP Neighborhood
MF GO:0030599 pectinesterase activity IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0042545 cell wall modification IEP Neighborhood
BP GO:0045229 external encapsulating structure organization IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
MF GO:0052689 carboxylic ester hydrolase activity IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0071554 cell wall organization or biogenesis IEP Neighborhood
BP GO:0071555 cell wall organization IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0098772 molecular function regulator IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!