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  5. AMTR_s00032p00241350

AMTR_s00032p00241350 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00032.279

Description : RNA biosynthesis.transcriptional activation.PLATZ transcription factor


Gene families : OG0000197 (Archaeplastida) Phylogenetic Tree(s): OG0000197_tree ,
OG_05_0000880 (LandPlants) Phylogenetic Tree(s): OG_05_0000880_tree ,
OG_06_0001431 (SeedPlants) Phylogenetic Tree(s): OG_06_0001431_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00032p00241350
Cluster HCCA: Cluster_203

Target Alias Description ECC score Gene Family Method Actions
AT2G12646 No alias PLATZ transcription factor family protein 0.03 Archaeplastida
GSVIVT01012869001 No alias RNA biosynthesis.transcriptional activation.PLATZ... 0.02 Archaeplastida
GSVIVT01013149001 No alias RNA biosynthesis.transcriptional activation.PLATZ... 0.03 Archaeplastida
LOC_Os02g07650.1 No alias transcription factor (PLATZ) 0.03 Archaeplastida
LOC_Os02g09070.1 No alias transcription factor (PLATZ) 0.02 Archaeplastida
LOC_Os06g41930.2 No alias transcription factor (PLATZ) 0.02 Archaeplastida
Solyc02g068510.2.1 No alias transcription factor (PLATZ) 0.04 Archaeplastida
Solyc07g007320.3.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc12g010470.3.1 No alias no hits & (original description: none) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006631 fatty acid metabolic process IEP Neighborhood
BP GO:0006633 fatty acid biosynthetic process IEP Neighborhood
MF GO:0008146 sulfotransferase activity IEP Neighborhood
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Neighborhood
MF GO:0030599 pectinesterase activity IEP Neighborhood
BP GO:0042545 cell wall modification IEP Neighborhood
BP GO:0045229 external encapsulating structure organization IEP Neighborhood
BP GO:0071554 cell wall organization or biogenesis IEP Neighborhood
BP GO:0071555 cell wall organization IEP Neighborhood
InterPro domains Description Start Stop
IPR006734 DUF597 71 142
No external refs found!